Gene : Brara.E02582 B. rapa FPsc v1.3

Defline:  (1 of 2) PTHR33427:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MQD17 Genomic Order:  2582
Name:  ? Brara.E02582 Secondary Identifier:  ? PAC:30624010

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02582 0.5kb upstream 0.5kb upstream 3354 true A05: 22787910-22791263 Brassica rapa FPsc
Brara.E02582 0.5kb upstream 0.5kb upstream 500 false A05: 22790764-22791263 Brassica rapa FPsc
Brara.E02582 0.5kb downstream 0.5kb downstream 3354 true A05: 22787410-22790763 Brassica rapa FPsc
Brara.E02582 0.5kb downstream 0.5kb downstream 500 false A05: 22787410-22787909 Brassica rapa FPsc
Brara.E02582 1.0kb upstream 1.0kb upstream 3854 true A05: 22787910-22791763 Brassica rapa FPsc
Brara.E02582 1.0kb upstream 1.0kb upstream 1000 false A05: 22790764-22791763 Brassica rapa FPsc
Brara.E02582 1.0kb downstream 1.0kb downstream 3854 true A05: 22786910-22790763 Brassica rapa FPsc
Brara.E02582 1.0kb downstream 1.0kb downstream 1000 false A05: 22786910-22787909 Brassica rapa FPsc
Brara.E02582 2.0kb upstream 2.0kb upstream 4854 true A05: 22787910-22792763 Brassica rapa FPsc
Brara.E02582 2.0kb upstream 2.0kb upstream 2000 false A05: 22790764-22792763 Brassica rapa FPsc
Brara.E02582 2.0kb downstream 2.0kb downstream 4854 true A05: 22785910-22790763 Brassica rapa FPsc
Brara.E02582 2.0kb downstream 2.0kb downstream 2000 false A05: 22785910-22787909 Brassica rapa FPsc
Brara.E02582 5.0kb upstream 5.0kb upstream 7854 true A05: 22787910-22795763 Brassica rapa FPsc
Brara.E02582 5.0kb upstream 5.0kb upstream 5000 false A05: 22790764-22795763 Brassica rapa FPsc
Brara.E02582 5.0kb downstream 5.0kb downstream 7854 true A05: 22782910-22790763 Brassica rapa FPsc
Brara.E02582 5.0kb downstream 5.0kb downstream 5000 false A05: 22782910-22787909 Brassica rapa FPsc
Brara.E02582 10.0kb upstream 10.0kb upstream 12854 true A05: 22787910-22800763 Brassica rapa FPsc
Brara.E02582 10.0kb upstream 10.0kb upstream 10000 false A05: 22790764-22800763 Brassica rapa FPsc
Brara.E02582 10.0kb downstream 10.0kb downstream 12854 true A05: 22777910-22790763 Brassica rapa FPsc
Brara.E02582 10.0kb downstream 10.0kb downstream 10000 false A05: 22777910-22787909 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369588 5261 Brassicaceae View MSA
123840176 5264 Brassicales-Malvales View MSA
124341260 5266 SBM View MSA
124243288 5268 Malvidae View MSA
124074735 5270 Rosid View MSA
123746273 5271 Pentapetalae View MSA
122791628 5272 Eudicot View MSA
122044746 5273 Angiosperm View MSA
121349480 5274 Embryophyte View MSA
123381326 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier