Gene : Brara.C01419 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR12653 - NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT Genomic Order:  1419
Name:  ? Brara.C01419 Secondary Identifier:  ? PAC:30615259
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3781 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4302 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5083 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01419 0.5kb upstream 0.5kb upstream 2569 true A03: 6827755-6830323 Brassica rapa FPsc
Brara.C01419 0.5kb upstream 0.5kb upstream 500 false A03: 6829824-6830323 Brassica rapa FPsc
Brara.C01419 0.5kb downstream 0.5kb downstream 2569 true A03: 6827255-6829823 Brassica rapa FPsc
Brara.C01419 0.5kb downstream 0.5kb downstream 500 false A03: 6827255-6827754 Brassica rapa FPsc
Brara.C01419 1.0kb upstream 1.0kb upstream 3069 true A03: 6827755-6830823 Brassica rapa FPsc
Brara.C01419 1.0kb upstream 1.0kb upstream 1000 false A03: 6829824-6830823 Brassica rapa FPsc
Brara.C01419 1.0kb downstream 1.0kb downstream 3069 true A03: 6826755-6829823 Brassica rapa FPsc
Brara.C01419 1.0kb downstream 1.0kb downstream 1000 false A03: 6826755-6827754 Brassica rapa FPsc
Brara.C01419 2.0kb upstream 2.0kb upstream 4069 true A03: 6827755-6831823 Brassica rapa FPsc
Brara.C01419 2.0kb upstream 2.0kb upstream 2000 false A03: 6829824-6831823 Brassica rapa FPsc
Brara.C01419 2.0kb downstream 2.0kb downstream 4069 true A03: 6825755-6829823 Brassica rapa FPsc
Brara.C01419 2.0kb downstream 2.0kb downstream 2000 false A03: 6825755-6827754 Brassica rapa FPsc
Brara.C01419 5.0kb upstream 5.0kb upstream 7069 true A03: 6827755-6834823 Brassica rapa FPsc
Brara.C01419 5.0kb upstream 5.0kb upstream 5000 false A03: 6829824-6834823 Brassica rapa FPsc
Brara.C01419 5.0kb downstream 5.0kb downstream 7069 true A03: 6822755-6829823 Brassica rapa FPsc
Brara.C01419 5.0kb downstream 5.0kb downstream 5000 false A03: 6822755-6827754 Brassica rapa FPsc
Brara.C01419 10.0kb upstream 10.0kb upstream 12069 true A03: 6827755-6839823 Brassica rapa FPsc
Brara.C01419 10.0kb upstream 10.0kb upstream 10000 false A03: 6829824-6839823 Brassica rapa FPsc
Brara.C01419 10.0kb downstream 10.0kb downstream 12069 true A03: 6817755-6829823 Brassica rapa FPsc
Brara.C01419 10.0kb downstream 10.0kb downstream 10000 false A03: 6817755-6827754 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381234 5261 Brassicaceae View MSA
123838702 5264 Brassicales-Malvales View MSA
124341816 5266 SBM View MSA
124240898 5268 Malvidae View MSA
124062156 5270 Rosid View MSA
123746684 5271 Pentapetalae View MSA
122793843 5272 Eudicot View MSA
122046813 5273 Angiosperm View MSA
121348614 5274 Embryophyte View MSA
123425136 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier