Gene : Brara.C01460 B. rapa FPsc v1.3
Defline:  (1 of 15) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Genomic Order:  1460
Name:  ? Brara.C01460 Secondary Identifier:  ? PAC:30618120
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01460 0.5kb upstream 0.5kb upstream 3584 true A03: 7013726-7017309 Brassica rapa FPsc
Brara.C01460 0.5kb upstream 0.5kb upstream 500 false A03: 7013726-7014225 Brassica rapa FPsc
Brara.C01460 0.5kb downstream 0.5kb downstream 3584 true A03: 7014226-7017809 Brassica rapa FPsc
Brara.C01460 0.5kb downstream 0.5kb downstream 500 false A03: 7017310-7017809 Brassica rapa FPsc
Brara.C01460 1.0kb upstream 1.0kb upstream 4084 true A03: 7013226-7017309 Brassica rapa FPsc
Brara.C01460 1.0kb upstream 1.0kb upstream 1000 false A03: 7013226-7014225 Brassica rapa FPsc
Brara.C01460 1.0kb downstream 1.0kb downstream 4084 true A03: 7014226-7018309 Brassica rapa FPsc
Brara.C01460 1.0kb downstream 1.0kb downstream 1000 false A03: 7017310-7018309 Brassica rapa FPsc
Brara.C01460 2.0kb upstream 2.0kb upstream 5084 true A03: 7012226-7017309 Brassica rapa FPsc
Brara.C01460 2.0kb upstream 2.0kb upstream 2000 false A03: 7012226-7014225 Brassica rapa FPsc
Brara.C01460 2.0kb downstream 2.0kb downstream 5084 true A03: 7014226-7019309 Brassica rapa FPsc
Brara.C01460 2.0kb downstream 2.0kb downstream 2000 false A03: 7017310-7019309 Brassica rapa FPsc
Brara.C01460 5.0kb upstream 5.0kb upstream 8084 true A03: 7009226-7017309 Brassica rapa FPsc
Brara.C01460 5.0kb upstream 5.0kb upstream 5000 false A03: 7009226-7014225 Brassica rapa FPsc
Brara.C01460 5.0kb downstream 5.0kb downstream 8084 true A03: 7014226-7022309 Brassica rapa FPsc
Brara.C01460 5.0kb downstream 5.0kb downstream 5000 false A03: 7017310-7022309 Brassica rapa FPsc
Brara.C01460 10.0kb upstream 10.0kb upstream 13084 true A03: 7004226-7017309 Brassica rapa FPsc
Brara.C01460 10.0kb upstream 10.0kb upstream 10000 false A03: 7004226-7014225 Brassica rapa FPsc
Brara.C01460 10.0kb downstream 10.0kb downstream 13084 true A03: 7014226-7027309 Brassica rapa FPsc
Brara.C01460 10.0kb downstream 10.0kb downstream 10000 false A03: 7017310-7027309 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377526 5261 Brassicaceae View MSA
123801556 5264 Brassicales-Malvales View MSA
124298845 5266 SBM View MSA
124150395 5268 Malvidae View MSA
124073798 5270 Rosid View MSA
123750432 5271 Pentapetalae View MSA
122795311 5272 Eudicot View MSA
122042392 5273 Angiosperm View MSA
121309956 5274 Embryophyte View MSA
123347576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier