Gene : Brara.J00961 B. rapa FPsc v1.3
Defline:  (1 of 4) 2.3.1.61 - Dihydrolipoyllysine-residue succinyltransferase / Succinyl-CoA:dihydrolipoate S-succinyltransferase Genomic Order:  961
Name:  ? Brara.J00961 Secondary Identifier:  ? PAC:30612691
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5084 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00961 0.5kb upstream 0.5kb upstream 4060 true A10: 9590267-9594326 Brassica rapa FPsc
Brara.J00961 0.5kb upstream 0.5kb upstream 500 false A10: 9590267-9590766 Brassica rapa FPsc
Brara.J00961 0.5kb downstream 0.5kb downstream 4060 true A10: 9590767-9594826 Brassica rapa FPsc
Brara.J00961 0.5kb downstream 0.5kb downstream 500 false A10: 9594327-9594826 Brassica rapa FPsc
Brara.J00961 1.0kb upstream 1.0kb upstream 4560 true A10: 9589767-9594326 Brassica rapa FPsc
Brara.J00961 1.0kb upstream 1.0kb upstream 1000 false A10: 9589767-9590766 Brassica rapa FPsc
Brara.J00961 1.0kb downstream 1.0kb downstream 4560 true A10: 9590767-9595326 Brassica rapa FPsc
Brara.J00961 1.0kb downstream 1.0kb downstream 1000 false A10: 9594327-9595326 Brassica rapa FPsc
Brara.J00961 2.0kb upstream 2.0kb upstream 5560 true A10: 9588767-9594326 Brassica rapa FPsc
Brara.J00961 2.0kb upstream 2.0kb upstream 2000 false A10: 9588767-9590766 Brassica rapa FPsc
Brara.J00961 2.0kb downstream 2.0kb downstream 5560 true A10: 9590767-9596326 Brassica rapa FPsc
Brara.J00961 2.0kb downstream 2.0kb downstream 2000 false A10: 9594327-9596326 Brassica rapa FPsc
Brara.J00961 5.0kb upstream 5.0kb upstream 8560 true A10: 9585767-9594326 Brassica rapa FPsc
Brara.J00961 5.0kb upstream 5.0kb upstream 5000 false A10: 9585767-9590766 Brassica rapa FPsc
Brara.J00961 5.0kb downstream 5.0kb downstream 8560 true A10: 9590767-9599326 Brassica rapa FPsc
Brara.J00961 5.0kb downstream 5.0kb downstream 5000 false A10: 9594327-9599326 Brassica rapa FPsc
Brara.J00961 10.0kb upstream 10.0kb upstream 13560 true A10: 9580767-9594326 Brassica rapa FPsc
Brara.J00961 10.0kb upstream 10.0kb upstream 10000 false A10: 9580767-9590766 Brassica rapa FPsc
Brara.J00961 10.0kb downstream 10.0kb downstream 13560 true A10: 9590767-9604326 Brassica rapa FPsc
Brara.J00961 10.0kb downstream 10.0kb downstream 10000 false A10: 9594327-9604326 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346239 5261 Brassicaceae Singleton cluster - no MSA
123785956 5264 Brassicales-Malvales Singleton cluster - no MSA
124284080 5266 SBM Singleton cluster - no MSA
124250651 5268 Malvidae View MSA
124065559 5270 Rosid View MSA
123743660 5271 Pentapetalae View MSA
122793547 5272 Eudicot View MSA
122045600 5273 Angiosperm View MSA
121347048 5274 Embryophyte View MSA
123423906 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier