Gene : Brara.E02505 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11851//PTHR11851:SF145 - METALLOPROTEASE Genomic Order:  2505
Name:  ? Brara.E02505 Secondary Identifier:  ? PAC:30624122
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3781 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7279 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02505 0.5kb upstream 0.5kb upstream 3982 true A05: 22304526-22308507 Brassica rapa FPsc
Brara.E02505 0.5kb upstream 0.5kb upstream 500 false A05: 22308008-22308507 Brassica rapa FPsc
Brara.E02505 0.5kb downstream 0.5kb downstream 3982 true A05: 22304026-22308007 Brassica rapa FPsc
Brara.E02505 0.5kb downstream 0.5kb downstream 500 false A05: 22304026-22304525 Brassica rapa FPsc
Brara.E02505 1.0kb upstream 1.0kb upstream 4482 true A05: 22304526-22309007 Brassica rapa FPsc
Brara.E02505 1.0kb upstream 1.0kb upstream 1000 false A05: 22308008-22309007 Brassica rapa FPsc
Brara.E02505 1.0kb downstream 1.0kb downstream 4482 true A05: 22303526-22308007 Brassica rapa FPsc
Brara.E02505 1.0kb downstream 1.0kb downstream 1000 false A05: 22303526-22304525 Brassica rapa FPsc
Brara.E02505 2.0kb upstream 2.0kb upstream 5482 true A05: 22304526-22310007 Brassica rapa FPsc
Brara.E02505 2.0kb upstream 2.0kb upstream 2000 false A05: 22308008-22310007 Brassica rapa FPsc
Brara.E02505 2.0kb downstream 2.0kb downstream 5482 true A05: 22302526-22308007 Brassica rapa FPsc
Brara.E02505 2.0kb downstream 2.0kb downstream 2000 false A05: 22302526-22304525 Brassica rapa FPsc
Brara.E02505 5.0kb upstream 5.0kb upstream 8482 true A05: 22304526-22313007 Brassica rapa FPsc
Brara.E02505 5.0kb upstream 5.0kb upstream 5000 false A05: 22308008-22313007 Brassica rapa FPsc
Brara.E02505 5.0kb downstream 5.0kb downstream 8482 true A05: 22299526-22308007 Brassica rapa FPsc
Brara.E02505 5.0kb downstream 5.0kb downstream 5000 false A05: 22299526-22304525 Brassica rapa FPsc
Brara.E02505 10.0kb upstream 10.0kb upstream 13482 true A05: 22304526-22318007 Brassica rapa FPsc
Brara.E02505 10.0kb upstream 10.0kb upstream 10000 false A05: 22308008-22318007 Brassica rapa FPsc
Brara.E02505 10.0kb downstream 10.0kb downstream 13482 true A05: 22294526-22308007 Brassica rapa FPsc
Brara.E02505 10.0kb downstream 10.0kb downstream 10000 false A05: 22294526-22304525 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
122375459 5261 Brassicaceae View MSA
123837486 5264 Brassicales-Malvales View MSA
124346987 5266 SBM View MSA
124244870 5268 Malvidae View MSA
124064083 5270 Rosid View MSA
123738249 5271 Pentapetalae View MSA
122789346 5272 Eudicot View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier