Gene : Brara.C01496 B. rapa FPsc v1.3
Defline:  (1 of 15) PF07899 - Frigida-like protein (Frigida) Genomic Order:  1496
Name:  ? Brara.C01496 Secondary Identifier:  ? PAC:30615961
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01496 0.5kb upstream 0.5kb upstream 2810 true A03: 7197114-7199923 Brassica rapa FPsc
Brara.C01496 0.5kb upstream 0.5kb upstream 500 false A03: 7199424-7199923 Brassica rapa FPsc
Brara.C01496 0.5kb downstream 0.5kb downstream 2810 true A03: 7196614-7199423 Brassica rapa FPsc
Brara.C01496 0.5kb downstream 0.5kb downstream 500 false A03: 7196614-7197113 Brassica rapa FPsc
Brara.C01496 1.0kb upstream 1.0kb upstream 3310 true A03: 7197114-7200423 Brassica rapa FPsc
Brara.C01496 1.0kb upstream 1.0kb upstream 1000 false A03: 7199424-7200423 Brassica rapa FPsc
Brara.C01496 1.0kb downstream 1.0kb downstream 3310 true A03: 7196114-7199423 Brassica rapa FPsc
Brara.C01496 1.0kb downstream 1.0kb downstream 1000 false A03: 7196114-7197113 Brassica rapa FPsc
Brara.C01496 2.0kb upstream 2.0kb upstream 4310 true A03: 7197114-7201423 Brassica rapa FPsc
Brara.C01496 2.0kb upstream 2.0kb upstream 2000 false A03: 7199424-7201423 Brassica rapa FPsc
Brara.C01496 2.0kb downstream 2.0kb downstream 4310 true A03: 7195114-7199423 Brassica rapa FPsc
Brara.C01496 2.0kb downstream 2.0kb downstream 2000 false A03: 7195114-7197113 Brassica rapa FPsc
Brara.C01496 5.0kb upstream 5.0kb upstream 7310 true A03: 7197114-7204423 Brassica rapa FPsc
Brara.C01496 5.0kb upstream 5.0kb upstream 5000 false A03: 7199424-7204423 Brassica rapa FPsc
Brara.C01496 5.0kb downstream 5.0kb downstream 7310 true A03: 7192114-7199423 Brassica rapa FPsc
Brara.C01496 5.0kb downstream 5.0kb downstream 5000 false A03: 7192114-7197113 Brassica rapa FPsc
Brara.C01496 10.0kb upstream 10.0kb upstream 12310 true A03: 7197114-7209423 Brassica rapa FPsc
Brara.C01496 10.0kb upstream 10.0kb upstream 10000 false A03: 7199424-7209423 Brassica rapa FPsc
Brara.C01496 10.0kb downstream 10.0kb downstream 12310 true A03: 7187114-7199423 Brassica rapa FPsc
Brara.C01496 10.0kb downstream 10.0kb downstream 10000 false A03: 7187114-7197113 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347075 5261 Brassicaceae Singleton cluster - no MSA
123786663 5264 Brassicales-Malvales Singleton cluster - no MSA
124284764 5266 SBM Singleton cluster - no MSA
124251092 5268 Malvidae View MSA
124068332 5270 Rosid View MSA
123746109 5271 Pentapetalae View MSA
122785719 5272 Eudicot View MSA
122043307 5273 Angiosperm View MSA
121310105 5274 Embryophyte View MSA
123347687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier