Gene : Brara.J01023 B. rapa FPsc v1.3
Defline:  (1 of 39) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  1023
Name:  ? Brara.J01023 Secondary Identifier:  ? PAC:30613655
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01023 0.5kb upstream 0.5kb upstream 3989 true A10: 9967193-9971181 Brassica rapa FPsc
Brara.J01023 0.5kb upstream 0.5kb upstream 500 false A10: 9967193-9967692 Brassica rapa FPsc
Brara.J01023 0.5kb downstream 0.5kb downstream 3989 true A10: 9967693-9971681 Brassica rapa FPsc
Brara.J01023 0.5kb downstream 0.5kb downstream 500 false A10: 9971182-9971681 Brassica rapa FPsc
Brara.J01023 1.0kb upstream 1.0kb upstream 4489 true A10: 9966693-9971181 Brassica rapa FPsc
Brara.J01023 1.0kb upstream 1.0kb upstream 1000 false A10: 9966693-9967692 Brassica rapa FPsc
Brara.J01023 1.0kb downstream 1.0kb downstream 4489 true A10: 9967693-9972181 Brassica rapa FPsc
Brara.J01023 1.0kb downstream 1.0kb downstream 1000 false A10: 9971182-9972181 Brassica rapa FPsc
Brara.J01023 2.0kb upstream 2.0kb upstream 5489 true A10: 9965693-9971181 Brassica rapa FPsc
Brara.J01023 2.0kb upstream 2.0kb upstream 2000 false A10: 9965693-9967692 Brassica rapa FPsc
Brara.J01023 2.0kb downstream 2.0kb downstream 5489 true A10: 9967693-9973181 Brassica rapa FPsc
Brara.J01023 2.0kb downstream 2.0kb downstream 2000 false A10: 9971182-9973181 Brassica rapa FPsc
Brara.J01023 5.0kb upstream 5.0kb upstream 8489 true A10: 9962693-9971181 Brassica rapa FPsc
Brara.J01023 5.0kb upstream 5.0kb upstream 5000 false A10: 9962693-9967692 Brassica rapa FPsc
Brara.J01023 5.0kb downstream 5.0kb downstream 8489 true A10: 9967693-9976181 Brassica rapa FPsc
Brara.J01023 5.0kb downstream 5.0kb downstream 5000 false A10: 9971182-9976181 Brassica rapa FPsc
Brara.J01023 10.0kb upstream 10.0kb upstream 13489 true A10: 9957693-9971181 Brassica rapa FPsc
Brara.J01023 10.0kb upstream 10.0kb upstream 10000 false A10: 9957693-9967692 Brassica rapa FPsc
Brara.J01023 10.0kb downstream 10.0kb downstream 13489 true A10: 9967693-9981181 Brassica rapa FPsc
Brara.J01023 10.0kb downstream 10.0kb downstream 10000 false A10: 9971182-9981181 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361725 5261 Brassicaceae View MSA
123839072 5264 Brassicales-Malvales View MSA
124344810 5266 SBM View MSA
124238568 5268 Malvidae View MSA
124066069 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier