Gene : Brara.J00834 B. rapa FPsc v1.3
Defline:  (1 of 36) KOG0417 - Ubiquitin-protein ligase Genomic Order:  834
Name:  ? Brara.J00834 Secondary Identifier:  ? PAC:30611682
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00834 0.5kb upstream 0.5kb upstream 2091 true A10: 8362013-8364103 Brassica rapa FPsc
Brara.J00834 0.5kb upstream 0.5kb upstream 500 false A10: 8363604-8364103 Brassica rapa FPsc
Brara.J00834 0.5kb downstream 0.5kb downstream 2091 true A10: 8361513-8363603 Brassica rapa FPsc
Brara.J00834 0.5kb downstream 0.5kb downstream 500 false A10: 8361513-8362012 Brassica rapa FPsc
Brara.J00834 1.0kb upstream 1.0kb upstream 2591 true A10: 8362013-8364603 Brassica rapa FPsc
Brara.J00834 1.0kb upstream 1.0kb upstream 1000 false A10: 8363604-8364603 Brassica rapa FPsc
Brara.J00834 1.0kb downstream 1.0kb downstream 2591 true A10: 8361013-8363603 Brassica rapa FPsc
Brara.J00834 1.0kb downstream 1.0kb downstream 1000 false A10: 8361013-8362012 Brassica rapa FPsc
Brara.J00834 2.0kb upstream 2.0kb upstream 3591 true A10: 8362013-8365603 Brassica rapa FPsc
Brara.J00834 2.0kb upstream 2.0kb upstream 2000 false A10: 8363604-8365603 Brassica rapa FPsc
Brara.J00834 2.0kb downstream 2.0kb downstream 3591 true A10: 8360013-8363603 Brassica rapa FPsc
Brara.J00834 2.0kb downstream 2.0kb downstream 2000 false A10: 8360013-8362012 Brassica rapa FPsc
Brara.J00834 5.0kb upstream 5.0kb upstream 6591 true A10: 8362013-8368603 Brassica rapa FPsc
Brara.J00834 5.0kb upstream 5.0kb upstream 5000 false A10: 8363604-8368603 Brassica rapa FPsc
Brara.J00834 5.0kb downstream 5.0kb downstream 6591 true A10: 8357013-8363603 Brassica rapa FPsc
Brara.J00834 5.0kb downstream 5.0kb downstream 5000 false A10: 8357013-8362012 Brassica rapa FPsc
Brara.J00834 10.0kb upstream 10.0kb upstream 11591 true A10: 8362013-8373603 Brassica rapa FPsc
Brara.J00834 10.0kb upstream 10.0kb upstream 10000 false A10: 8363604-8373603 Brassica rapa FPsc
Brara.J00834 10.0kb downstream 10.0kb downstream 11591 true A10: 8352013-8363603 Brassica rapa FPsc
Brara.J00834 10.0kb downstream 10.0kb downstream 10000 false A10: 8352013-8362012 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380723 5261 Brassicaceae View MSA
123840557 5264 Brassicales-Malvales View MSA
124322744 5266 SBM View MSA
124252421 5268 Malvidae View MSA
124072408 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier