Gene : Brara.C01317 B. rapa FPsc v1.3
Defline:  (1 of 4) 2.3.1.61 - Dihydrolipoyllysine-residue succinyltransferase / Succinyl-CoA:dihydrolipoate S-succinyltransferase Genomic Order:  1317
Name:  ? Brara.C01317 Secondary Identifier:  ? PAC:30618067
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5084 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01317 0.5kb upstream 0.5kb upstream 3969 true A03: 6161167-6165135 Brassica rapa FPsc
Brara.C01317 0.5kb upstream 0.5kb upstream 500 false A03: 6164636-6165135 Brassica rapa FPsc
Brara.C01317 0.5kb downstream 0.5kb downstream 3969 true A03: 6160667-6164635 Brassica rapa FPsc
Brara.C01317 0.5kb downstream 0.5kb downstream 500 false A03: 6160667-6161166 Brassica rapa FPsc
Brara.C01317 1.0kb upstream 1.0kb upstream 4469 true A03: 6161167-6165635 Brassica rapa FPsc
Brara.C01317 1.0kb upstream 1.0kb upstream 1000 false A03: 6164636-6165635 Brassica rapa FPsc
Brara.C01317 1.0kb downstream 1.0kb downstream 4469 true A03: 6160167-6164635 Brassica rapa FPsc
Brara.C01317 1.0kb downstream 1.0kb downstream 1000 false A03: 6160167-6161166 Brassica rapa FPsc
Brara.C01317 2.0kb upstream 2.0kb upstream 5469 true A03: 6161167-6166635 Brassica rapa FPsc
Brara.C01317 2.0kb upstream 2.0kb upstream 2000 false A03: 6164636-6166635 Brassica rapa FPsc
Brara.C01317 2.0kb downstream 2.0kb downstream 5469 true A03: 6159167-6164635 Brassica rapa FPsc
Brara.C01317 2.0kb downstream 2.0kb downstream 2000 false A03: 6159167-6161166 Brassica rapa FPsc
Brara.C01317 5.0kb upstream 5.0kb upstream 8469 true A03: 6161167-6169635 Brassica rapa FPsc
Brara.C01317 5.0kb upstream 5.0kb upstream 5000 false A03: 6164636-6169635 Brassica rapa FPsc
Brara.C01317 5.0kb downstream 5.0kb downstream 8469 true A03: 6156167-6164635 Brassica rapa FPsc
Brara.C01317 5.0kb downstream 5.0kb downstream 5000 false A03: 6156167-6161166 Brassica rapa FPsc
Brara.C01317 10.0kb upstream 10.0kb upstream 13469 true A03: 6161167-6174635 Brassica rapa FPsc
Brara.C01317 10.0kb upstream 10.0kb upstream 10000 false A03: 6164636-6174635 Brassica rapa FPsc
Brara.C01317 10.0kb downstream 10.0kb downstream 13469 true A03: 6151167-6164635 Brassica rapa FPsc
Brara.C01317 10.0kb downstream 10.0kb downstream 10000 false A03: 6151167-6161166 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362639 5261 Brassicaceae View MSA
123838684 5264 Brassicales-Malvales View MSA
124343102 5266 SBM View MSA
124250651 5268 Malvidae View MSA
124065559 5270 Rosid View MSA
123743660 5271 Pentapetalae View MSA
122793547 5272 Eudicot View MSA
122045600 5273 Angiosperm View MSA
121347048 5274 Embryophyte View MSA
123423906 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier