Gene : Brara.C01333 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR13268:SF1 - AUTOPHAGY-RELATED PROTEIN 18F Genomic Order:  1333
Name:  ? Brara.C01333 Secondary Identifier:  ? PAC:30618238
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01333 0.5kb upstream 0.5kb upstream 4037 true A03: 6234379-6238415 Brassica rapa FPsc
Brara.C01333 0.5kb upstream 0.5kb upstream 500 false A03: 6234379-6234878 Brassica rapa FPsc
Brara.C01333 0.5kb downstream 0.5kb downstream 4037 true A03: 6234879-6238915 Brassica rapa FPsc
Brara.C01333 0.5kb downstream 0.5kb downstream 500 false A03: 6238416-6238915 Brassica rapa FPsc
Brara.C01333 1.0kb upstream 1.0kb upstream 4537 true A03: 6233879-6238415 Brassica rapa FPsc
Brara.C01333 1.0kb upstream 1.0kb upstream 1000 false A03: 6233879-6234878 Brassica rapa FPsc
Brara.C01333 1.0kb downstream 1.0kb downstream 4537 true A03: 6234879-6239415 Brassica rapa FPsc
Brara.C01333 1.0kb downstream 1.0kb downstream 1000 false A03: 6238416-6239415 Brassica rapa FPsc
Brara.C01333 2.0kb upstream 2.0kb upstream 5537 true A03: 6232879-6238415 Brassica rapa FPsc
Brara.C01333 2.0kb upstream 2.0kb upstream 2000 false A03: 6232879-6234878 Brassica rapa FPsc
Brara.C01333 2.0kb downstream 2.0kb downstream 5537 true A03: 6234879-6240415 Brassica rapa FPsc
Brara.C01333 2.0kb downstream 2.0kb downstream 2000 false A03: 6238416-6240415 Brassica rapa FPsc
Brara.C01333 5.0kb upstream 5.0kb upstream 8537 true A03: 6229879-6238415 Brassica rapa FPsc
Brara.C01333 5.0kb upstream 5.0kb upstream 5000 false A03: 6229879-6234878 Brassica rapa FPsc
Brara.C01333 5.0kb downstream 5.0kb downstream 8537 true A03: 6234879-6243415 Brassica rapa FPsc
Brara.C01333 5.0kb downstream 5.0kb downstream 5000 false A03: 6238416-6243415 Brassica rapa FPsc
Brara.C01333 10.0kb upstream 10.0kb upstream 13537 true A03: 6224879-6238415 Brassica rapa FPsc
Brara.C01333 10.0kb upstream 10.0kb upstream 10000 false A03: 6224879-6234878 Brassica rapa FPsc
Brara.C01333 10.0kb downstream 10.0kb downstream 13537 true A03: 6234879-6248415 Brassica rapa FPsc
Brara.C01333 10.0kb downstream 10.0kb downstream 10000 false A03: 6238416-6248415 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362831 5261 Brassicaceae View MSA
123835786 5264 Brassicales-Malvales View MSA
124339182 5266 SBM View MSA
124241657 5268 Malvidae View MSA
124067149 5270 Rosid View MSA
123741778 5271 Pentapetalae View MSA
122794061 5272 Eudicot View MSA
122048367 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier