Gene : Brara.J00925 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10353:SF46 - BETA-GLUCOSIDASE 41-RELATED Genomic Order:  925
Name:  ? Brara.J00925 Secondary Identifier:  ? PAC:30611885
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5176 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7089 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7091 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7092 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00925 0.5kb upstream 0.5kb upstream 3247 true A10: 9214254-9217500 Brassica rapa FPsc
Brara.J00925 0.5kb upstream 0.5kb upstream 500 false A10: 9217001-9217500 Brassica rapa FPsc
Brara.J00925 0.5kb downstream 0.5kb downstream 3247 true A10: 9213754-9217000 Brassica rapa FPsc
Brara.J00925 0.5kb downstream 0.5kb downstream 500 false A10: 9213754-9214253 Brassica rapa FPsc
Brara.J00925 1.0kb upstream 1.0kb upstream 3747 true A10: 9214254-9218000 Brassica rapa FPsc
Brara.J00925 1.0kb upstream 1.0kb upstream 1000 false A10: 9217001-9218000 Brassica rapa FPsc
Brara.J00925 1.0kb downstream 1.0kb downstream 3747 true A10: 9213254-9217000 Brassica rapa FPsc
Brara.J00925 1.0kb downstream 1.0kb downstream 1000 false A10: 9213254-9214253 Brassica rapa FPsc
Brara.J00925 2.0kb upstream 2.0kb upstream 4747 true A10: 9214254-9219000 Brassica rapa FPsc
Brara.J00925 2.0kb upstream 2.0kb upstream 2000 false A10: 9217001-9219000 Brassica rapa FPsc
Brara.J00925 2.0kb downstream 2.0kb downstream 4747 true A10: 9212254-9217000 Brassica rapa FPsc
Brara.J00925 2.0kb downstream 2.0kb downstream 2000 false A10: 9212254-9214253 Brassica rapa FPsc
Brara.J00925 5.0kb upstream 5.0kb upstream 7747 true A10: 9214254-9222000 Brassica rapa FPsc
Brara.J00925 5.0kb upstream 5.0kb upstream 5000 false A10: 9217001-9222000 Brassica rapa FPsc
Brara.J00925 5.0kb downstream 5.0kb downstream 7747 true A10: 9209254-9217000 Brassica rapa FPsc
Brara.J00925 5.0kb downstream 5.0kb downstream 5000 false A10: 9209254-9214253 Brassica rapa FPsc
Brara.J00925 10.0kb upstream 10.0kb upstream 12747 true A10: 9214254-9227000 Brassica rapa FPsc
Brara.J00925 10.0kb upstream 10.0kb upstream 10000 false A10: 9217001-9227000 Brassica rapa FPsc
Brara.J00925 10.0kb downstream 10.0kb downstream 12747 true A10: 9204254-9217000 Brassica rapa FPsc
Brara.J00925 10.0kb downstream 10.0kb downstream 10000 false A10: 9204254-9214253 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371689 5261 Brassicaceae View MSA
123829312 5264 Brassicales-Malvales View MSA
124340387 5266 SBM View MSA
124237656 5268 Malvidae View MSA
124063418 5270 Rosid View MSA
123738242 5271 Pentapetalae View MSA
122788523 5272 Eudicot View MSA
122050283 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier