Gene : Brara.J00744 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10584:SF192 - FRUCTOKINASE 1 Genomic Order:  744
Name:  ? Brara.J00744 Secondary Identifier:  ? PAC:30612276
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3801 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4101 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-621 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00744 0.5kb upstream 0.5kb upstream 2553 true A10: 7263451-7266003 Brassica rapa FPsc
Brara.J00744 0.5kb upstream 0.5kb upstream 500 false A10: 7263451-7263950 Brassica rapa FPsc
Brara.J00744 0.5kb downstream 0.5kb downstream 2553 true A10: 7263951-7266503 Brassica rapa FPsc
Brara.J00744 0.5kb downstream 0.5kb downstream 500 false A10: 7266004-7266503 Brassica rapa FPsc
Brara.J00744 1.0kb upstream 1.0kb upstream 3053 true A10: 7262951-7266003 Brassica rapa FPsc
Brara.J00744 1.0kb upstream 1.0kb upstream 1000 false A10: 7262951-7263950 Brassica rapa FPsc
Brara.J00744 1.0kb downstream 1.0kb downstream 3053 true A10: 7263951-7267003 Brassica rapa FPsc
Brara.J00744 1.0kb downstream 1.0kb downstream 1000 false A10: 7266004-7267003 Brassica rapa FPsc
Brara.J00744 2.0kb upstream 2.0kb upstream 4053 true A10: 7261951-7266003 Brassica rapa FPsc
Brara.J00744 2.0kb upstream 2.0kb upstream 2000 false A10: 7261951-7263950 Brassica rapa FPsc
Brara.J00744 2.0kb downstream 2.0kb downstream 4053 true A10: 7263951-7268003 Brassica rapa FPsc
Brara.J00744 2.0kb downstream 2.0kb downstream 2000 false A10: 7266004-7268003 Brassica rapa FPsc
Brara.J00744 5.0kb upstream 5.0kb upstream 7053 true A10: 7258951-7266003 Brassica rapa FPsc
Brara.J00744 5.0kb upstream 5.0kb upstream 5000 false A10: 7258951-7263950 Brassica rapa FPsc
Brara.J00744 5.0kb downstream 5.0kb downstream 7053 true A10: 7263951-7271003 Brassica rapa FPsc
Brara.J00744 5.0kb downstream 5.0kb downstream 5000 false A10: 7266004-7271003 Brassica rapa FPsc
Brara.J00744 10.0kb upstream 10.0kb upstream 12053 true A10: 7253951-7266003 Brassica rapa FPsc
Brara.J00744 10.0kb upstream 10.0kb upstream 10000 false A10: 7253951-7263950 Brassica rapa FPsc
Brara.J00744 10.0kb downstream 10.0kb downstream 12053 true A10: 7263951-7276003 Brassica rapa FPsc
Brara.J00744 10.0kb downstream 10.0kb downstream 10000 false A10: 7266004-7276003 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346143 5261 Brassicaceae Singleton cluster - no MSA
123840927 5264 Brassicales-Malvales View MSA
124336568 5266 SBM View MSA
124254064 5268 Malvidae View MSA
124069533 5270 Rosid View MSA
123742774 5271 Pentapetalae View MSA
122790590 5272 Eudicot View MSA
122045850 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier