Gene : Brara.J00792 B. rapa FPsc v1.3
Defline:  (1 of 6) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  792
Name:  ? Brara.J00792 Secondary Identifier:  ? PAC:30613806
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00792 0.5kb upstream 0.5kb upstream 4011 true A10: 7878662-7882672 Brassica rapa FPsc
Brara.J00792 0.5kb upstream 0.5kb upstream 500 false A10: 7878662-7879161 Brassica rapa FPsc
Brara.J00792 0.5kb downstream 0.5kb downstream 4011 true A10: 7879162-7883172 Brassica rapa FPsc
Brara.J00792 0.5kb downstream 0.5kb downstream 500 false A10: 7882673-7883172 Brassica rapa FPsc
Brara.J00792 1.0kb upstream 1.0kb upstream 4511 true A10: 7878162-7882672 Brassica rapa FPsc
Brara.J00792 1.0kb upstream 1.0kb upstream 1000 false A10: 7878162-7879161 Brassica rapa FPsc
Brara.J00792 1.0kb downstream 1.0kb downstream 4511 true A10: 7879162-7883672 Brassica rapa FPsc
Brara.J00792 1.0kb downstream 1.0kb downstream 1000 false A10: 7882673-7883672 Brassica rapa FPsc
Brara.J00792 2.0kb upstream 2.0kb upstream 5511 true A10: 7877162-7882672 Brassica rapa FPsc
Brara.J00792 2.0kb upstream 2.0kb upstream 2000 false A10: 7877162-7879161 Brassica rapa FPsc
Brara.J00792 2.0kb downstream 2.0kb downstream 5511 true A10: 7879162-7884672 Brassica rapa FPsc
Brara.J00792 2.0kb downstream 2.0kb downstream 2000 false A10: 7882673-7884672 Brassica rapa FPsc
Brara.J00792 5.0kb upstream 5.0kb upstream 8511 true A10: 7874162-7882672 Brassica rapa FPsc
Brara.J00792 5.0kb upstream 5.0kb upstream 5000 false A10: 7874162-7879161 Brassica rapa FPsc
Brara.J00792 5.0kb downstream 5.0kb downstream 8511 true A10: 7879162-7887672 Brassica rapa FPsc
Brara.J00792 5.0kb downstream 5.0kb downstream 5000 false A10: 7882673-7887672 Brassica rapa FPsc
Brara.J00792 10.0kb upstream 10.0kb upstream 13511 true A10: 7869162-7882672 Brassica rapa FPsc
Brara.J00792 10.0kb upstream 10.0kb upstream 10000 false A10: 7869162-7879161 Brassica rapa FPsc
Brara.J00792 10.0kb downstream 10.0kb downstream 13511 true A10: 7879162-7892672 Brassica rapa FPsc
Brara.J00792 10.0kb downstream 10.0kb downstream 10000 false A10: 7882673-7892672 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121503976 5273 Angiosperm Singleton cluster - no MSA
122346480 5261 Brassicaceae Singleton cluster - no MSA
123786159 5264 Brassicales-Malvales Singleton cluster - no MSA
124284279 5266 SBM Singleton cluster - no MSA
124138530 5268 Malvidae Singleton cluster - no MSA
123866073 5270 Rosid Singleton cluster - no MSA
123451152 5271 Pentapetalae Singleton cluster - no MSA
122486664 5272 Eudicot Singleton cluster - no MSA
120777246 5274 Embryophyte Singleton cluster - no MSA
122819482 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

1 Strain

DB identifier