Gene : Brara.C01158 B. rapa FPsc v1.3
Defline:  (1 of 3) KOG1049 - Polyadenylation factor I complex, subunit FIP1 Genomic Order:  1158
Name:  ? Brara.C01158 Secondary Identifier:  ? PAC:30617791
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01158 0.5kb upstream 0.5kb upstream 4263 true A03: 5382859-5387121 Brassica rapa FPsc
Brara.C01158 0.5kb upstream 0.5kb upstream 500 false A03: 5386622-5387121 Brassica rapa FPsc
Brara.C01158 0.5kb downstream 0.5kb downstream 4263 true A03: 5382359-5386621 Brassica rapa FPsc
Brara.C01158 0.5kb downstream 0.5kb downstream 500 false A03: 5382359-5382858 Brassica rapa FPsc
Brara.C01158 1.0kb upstream 1.0kb upstream 4763 true A03: 5382859-5387621 Brassica rapa FPsc
Brara.C01158 1.0kb upstream 1.0kb upstream 1000 false A03: 5386622-5387621 Brassica rapa FPsc
Brara.C01158 1.0kb downstream 1.0kb downstream 4763 true A03: 5381859-5386621 Brassica rapa FPsc
Brara.C01158 1.0kb downstream 1.0kb downstream 1000 false A03: 5381859-5382858 Brassica rapa FPsc
Brara.C01158 2.0kb upstream 2.0kb upstream 5763 true A03: 5382859-5388621 Brassica rapa FPsc
Brara.C01158 2.0kb upstream 2.0kb upstream 2000 false A03: 5386622-5388621 Brassica rapa FPsc
Brara.C01158 2.0kb downstream 2.0kb downstream 5763 true A03: 5380859-5386621 Brassica rapa FPsc
Brara.C01158 2.0kb downstream 2.0kb downstream 2000 false A03: 5380859-5382858 Brassica rapa FPsc
Brara.C01158 5.0kb upstream 5.0kb upstream 8763 true A03: 5382859-5391621 Brassica rapa FPsc
Brara.C01158 5.0kb upstream 5.0kb upstream 5000 false A03: 5386622-5391621 Brassica rapa FPsc
Brara.C01158 5.0kb downstream 5.0kb downstream 8763 true A03: 5377859-5386621 Brassica rapa FPsc
Brara.C01158 5.0kb downstream 5.0kb downstream 5000 false A03: 5377859-5382858 Brassica rapa FPsc
Brara.C01158 10.0kb upstream 10.0kb upstream 13763 true A03: 5382859-5396621 Brassica rapa FPsc
Brara.C01158 10.0kb upstream 10.0kb upstream 10000 false A03: 5386622-5396621 Brassica rapa FPsc
Brara.C01158 10.0kb downstream 10.0kb downstream 13763 true A03: 5372859-5386621 Brassica rapa FPsc
Brara.C01158 10.0kb downstream 10.0kb downstream 10000 false A03: 5372859-5382858 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347597 5261 Brassicaceae Singleton cluster - no MSA
123842320 5264 Brassicales-Malvales View MSA
124323395 5266 SBM View MSA
124169445 5268 Malvidae View MSA
123892416 5270 Rosid View MSA
123474535 5271 Pentapetalae View MSA
122509804 5272 Eudicot View MSA
122050325 5273 Angiosperm View MSA
121345578 5274 Embryophyte View MSA
123425422 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier