Gene : Brara.J00660 B. rapa FPsc v1.3
Defline:  (1 of 1) 2.5.1.72 - Quinolinate synthase / Quinolinate synthetase Genomic Order:  660
Name:  ? Brara.J00660 Secondary Identifier:  ? PAC:30612009
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PYRIDNUCSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00660 0.5kb upstream 0.5kb upstream 3595 true A10: 5875487-5879081 Brassica rapa FPsc
Brara.J00660 0.5kb upstream 0.5kb upstream 500 false A10: 5878582-5879081 Brassica rapa FPsc
Brara.J00660 0.5kb downstream 0.5kb downstream 3595 true A10: 5874987-5878581 Brassica rapa FPsc
Brara.J00660 0.5kb downstream 0.5kb downstream 500 false A10: 5874987-5875486 Brassica rapa FPsc
Brara.J00660 1.0kb upstream 1.0kb upstream 4095 true A10: 5875487-5879581 Brassica rapa FPsc
Brara.J00660 1.0kb upstream 1.0kb upstream 1000 false A10: 5878582-5879581 Brassica rapa FPsc
Brara.J00660 1.0kb downstream 1.0kb downstream 4095 true A10: 5874487-5878581 Brassica rapa FPsc
Brara.J00660 1.0kb downstream 1.0kb downstream 1000 false A10: 5874487-5875486 Brassica rapa FPsc
Brara.J00660 2.0kb upstream 2.0kb upstream 5095 true A10: 5875487-5880581 Brassica rapa FPsc
Brara.J00660 2.0kb upstream 2.0kb upstream 2000 false A10: 5878582-5880581 Brassica rapa FPsc
Brara.J00660 2.0kb downstream 2.0kb downstream 5095 true A10: 5873487-5878581 Brassica rapa FPsc
Brara.J00660 2.0kb downstream 2.0kb downstream 2000 false A10: 5873487-5875486 Brassica rapa FPsc
Brara.J00660 5.0kb upstream 5.0kb upstream 8095 true A10: 5875487-5883581 Brassica rapa FPsc
Brara.J00660 5.0kb upstream 5.0kb upstream 5000 false A10: 5878582-5883581 Brassica rapa FPsc
Brara.J00660 5.0kb downstream 5.0kb downstream 8095 true A10: 5870487-5878581 Brassica rapa FPsc
Brara.J00660 5.0kb downstream 5.0kb downstream 5000 false A10: 5870487-5875486 Brassica rapa FPsc
Brara.J00660 10.0kb upstream 10.0kb upstream 13095 true A10: 5875487-5888581 Brassica rapa FPsc
Brara.J00660 10.0kb upstream 10.0kb upstream 10000 false A10: 5878582-5888581 Brassica rapa FPsc
Brara.J00660 10.0kb downstream 10.0kb downstream 13095 true A10: 5865487-5878581 Brassica rapa FPsc
Brara.J00660 10.0kb downstream 10.0kb downstream 10000 false A10: 5865487-5875486 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373210 5261 Brassicaceae View MSA
123834496 5264 Brassicales-Malvales View MSA
124344776 5266 SBM View MSA
124241572 5268 Malvidae View MSA
124063584 5270 Rosid View MSA
123753415 5271 Pentapetalae View MSA
122792816 5272 Eudicot View MSA
122044938 5273 Angiosperm View MSA
121346502 5274 Embryophyte View MSA
123424432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier