Gene : Brara.C01254 B. rapa FPsc v1.3
Defline:  (1 of 20) 2.7.1.40 - Pyruvate kinase / Phosphoenolpyruvate kinase Genomic Order:  1254
Name:  ? Brara.C01254 Secondary Identifier:  ? PAC:30618109
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ANAEROFRUCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ANAGLYCOLYSIS-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-1042 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5723 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01254 0.5kb upstream 0.5kb upstream 3602 true A03: 5868276-5871877 Brassica rapa FPsc
Brara.C01254 0.5kb upstream 0.5kb upstream 500 false A03: 5868276-5868775 Brassica rapa FPsc
Brara.C01254 0.5kb downstream 0.5kb downstream 3602 true A03: 5868776-5872377 Brassica rapa FPsc
Brara.C01254 0.5kb downstream 0.5kb downstream 500 false A03: 5871878-5872377 Brassica rapa FPsc
Brara.C01254 1.0kb upstream 1.0kb upstream 4102 true A03: 5867776-5871877 Brassica rapa FPsc
Brara.C01254 1.0kb upstream 1.0kb upstream 1000 false A03: 5867776-5868775 Brassica rapa FPsc
Brara.C01254 1.0kb downstream 1.0kb downstream 4102 true A03: 5868776-5872877 Brassica rapa FPsc
Brara.C01254 1.0kb downstream 1.0kb downstream 1000 false A03: 5871878-5872877 Brassica rapa FPsc
Brara.C01254 2.0kb upstream 2.0kb upstream 5102 true A03: 5866776-5871877 Brassica rapa FPsc
Brara.C01254 2.0kb upstream 2.0kb upstream 2000 false A03: 5866776-5868775 Brassica rapa FPsc
Brara.C01254 2.0kb downstream 2.0kb downstream 5102 true A03: 5868776-5873877 Brassica rapa FPsc
Brara.C01254 2.0kb downstream 2.0kb downstream 2000 false A03: 5871878-5873877 Brassica rapa FPsc
Brara.C01254 5.0kb upstream 5.0kb upstream 8102 true A03: 5863776-5871877 Brassica rapa FPsc
Brara.C01254 5.0kb upstream 5.0kb upstream 5000 false A03: 5863776-5868775 Brassica rapa FPsc
Brara.C01254 5.0kb downstream 5.0kb downstream 8102 true A03: 5868776-5876877 Brassica rapa FPsc
Brara.C01254 5.0kb downstream 5.0kb downstream 5000 false A03: 5871878-5876877 Brassica rapa FPsc
Brara.C01254 10.0kb upstream 10.0kb upstream 13102 true A03: 5858776-5871877 Brassica rapa FPsc
Brara.C01254 10.0kb upstream 10.0kb upstream 10000 false A03: 5858776-5868775 Brassica rapa FPsc
Brara.C01254 10.0kb downstream 10.0kb downstream 13102 true A03: 5868776-5881877 Brassica rapa FPsc
Brara.C01254 10.0kb downstream 10.0kb downstream 10000 false A03: 5871878-5881877 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347692 5261 Brassicaceae Singleton cluster - no MSA
123839503 5264 Brassicales-Malvales View MSA
124350991 5266 SBM View MSA
124237186 5268 Malvidae View MSA
124068384 5270 Rosid View MSA
123737970 5271 Pentapetalae View MSA
122792873 5272 Eudicot View MSA
122044181 5273 Angiosperm View MSA
121310247 5274 Embryophyte View MSA
123427047 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier