Gene : Brara.C01255 B. rapa FPsc v1.3
Defline:  (1 of 9) PTHR22763:SF59 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MRP15 Genomic Order:  1255
Name:  ? Brara.C01255 Secondary Identifier:  ? PAC:30619616
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01255 0.5kb upstream 0.5kb upstream 2326 true A03: 5872352-5874677 Brassica rapa FPsc
Brara.C01255 0.5kb upstream 0.5kb upstream 500 false A03: 5874178-5874677 Brassica rapa FPsc
Brara.C01255 0.5kb downstream 0.5kb downstream 2326 true A03: 5871852-5874177 Brassica rapa FPsc
Brara.C01255 0.5kb downstream 0.5kb downstream 500 false A03: 5871852-5872351 Brassica rapa FPsc
Brara.C01255 1.0kb upstream 1.0kb upstream 2826 true A03: 5872352-5875177 Brassica rapa FPsc
Brara.C01255 1.0kb upstream 1.0kb upstream 1000 false A03: 5874178-5875177 Brassica rapa FPsc
Brara.C01255 1.0kb downstream 1.0kb downstream 2826 true A03: 5871352-5874177 Brassica rapa FPsc
Brara.C01255 1.0kb downstream 1.0kb downstream 1000 false A03: 5871352-5872351 Brassica rapa FPsc
Brara.C01255 2.0kb upstream 2.0kb upstream 3826 true A03: 5872352-5876177 Brassica rapa FPsc
Brara.C01255 2.0kb upstream 2.0kb upstream 2000 false A03: 5874178-5876177 Brassica rapa FPsc
Brara.C01255 2.0kb downstream 2.0kb downstream 3826 true A03: 5870352-5874177 Brassica rapa FPsc
Brara.C01255 2.0kb downstream 2.0kb downstream 2000 false A03: 5870352-5872351 Brassica rapa FPsc
Brara.C01255 5.0kb upstream 5.0kb upstream 6826 true A03: 5872352-5879177 Brassica rapa FPsc
Brara.C01255 5.0kb upstream 5.0kb upstream 5000 false A03: 5874178-5879177 Brassica rapa FPsc
Brara.C01255 5.0kb downstream 5.0kb downstream 6826 true A03: 5867352-5874177 Brassica rapa FPsc
Brara.C01255 5.0kb downstream 5.0kb downstream 5000 false A03: 5867352-5872351 Brassica rapa FPsc
Brara.C01255 10.0kb upstream 10.0kb upstream 11826 true A03: 5872352-5884177 Brassica rapa FPsc
Brara.C01255 10.0kb upstream 10.0kb upstream 10000 false A03: 5874178-5884177 Brassica rapa FPsc
Brara.C01255 10.0kb downstream 10.0kb downstream 11826 true A03: 5862352-5874177 Brassica rapa FPsc
Brara.C01255 10.0kb downstream 10.0kb downstream 10000 false A03: 5862352-5872351 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360909 5261 Brassicaceae View MSA
123831486 5264 Brassicales-Malvales View MSA
124343281 5266 SBM View MSA
124245159 5268 Malvidae View MSA
124061654 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier