Gene : Brara.E02396 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10091//PTHR10091:SF8 - ALDOSE-1-EPIMERASE Genomic Order:  2396
Name:  ? Brara.E02396 Secondary Identifier:  ? PAC:30623729
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY66-422 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02396 0.5kb upstream 0.5kb upstream 2447 true A05: 21640148-21642594 Brassica rapa FPsc
Brara.E02396 0.5kb upstream 0.5kb upstream 500 false A05: 21640148-21640647 Brassica rapa FPsc
Brara.E02396 0.5kb downstream 0.5kb downstream 2447 true A05: 21640648-21643094 Brassica rapa FPsc
Brara.E02396 0.5kb downstream 0.5kb downstream 500 false A05: 21642595-21643094 Brassica rapa FPsc
Brara.E02396 1.0kb upstream 1.0kb upstream 2947 true A05: 21639648-21642594 Brassica rapa FPsc
Brara.E02396 1.0kb upstream 1.0kb upstream 1000 false A05: 21639648-21640647 Brassica rapa FPsc
Brara.E02396 1.0kb downstream 1.0kb downstream 2947 true A05: 21640648-21643594 Brassica rapa FPsc
Brara.E02396 1.0kb downstream 1.0kb downstream 1000 false A05: 21642595-21643594 Brassica rapa FPsc
Brara.E02396 2.0kb upstream 2.0kb upstream 3947 true A05: 21638648-21642594 Brassica rapa FPsc
Brara.E02396 2.0kb upstream 2.0kb upstream 2000 false A05: 21638648-21640647 Brassica rapa FPsc
Brara.E02396 2.0kb downstream 2.0kb downstream 3947 true A05: 21640648-21644594 Brassica rapa FPsc
Brara.E02396 2.0kb downstream 2.0kb downstream 2000 false A05: 21642595-21644594 Brassica rapa FPsc
Brara.E02396 5.0kb upstream 5.0kb upstream 6947 true A05: 21635648-21642594 Brassica rapa FPsc
Brara.E02396 5.0kb upstream 5.0kb upstream 5000 false A05: 21635648-21640647 Brassica rapa FPsc
Brara.E02396 5.0kb downstream 5.0kb downstream 6947 true A05: 21640648-21647594 Brassica rapa FPsc
Brara.E02396 5.0kb downstream 5.0kb downstream 5000 false A05: 21642595-21647594 Brassica rapa FPsc
Brara.E02396 10.0kb upstream 10.0kb upstream 11947 true A05: 21630648-21642594 Brassica rapa FPsc
Brara.E02396 10.0kb upstream 10.0kb upstream 10000 false A05: 21630648-21640647 Brassica rapa FPsc
Brara.E02396 10.0kb downstream 10.0kb downstream 11947 true A05: 21640648-21652594 Brassica rapa FPsc
Brara.E02396 10.0kb downstream 10.0kb downstream 10000 false A05: 21642595-21652594 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349175 5261 Brassicaceae Singleton cluster - no MSA
123788405 5264 Brassicales-Malvales Singleton cluster - no MSA
124286438 5266 SBM Singleton cluster - no MSA
124251209 5268 Malvidae View MSA
124068882 5270 Rosid View MSA
123737067 5271 Pentapetalae View MSA
122789360 5272 Eudicot View MSA
122043649 5273 Angiosperm View MSA
121346493 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier