Gene : Brara.J00545 B. rapa FPsc v1.3

Defline:  (1 of 2) 6.5.1.4 - RNA 3'-terminal-phosphate cyclase (ATP) / RNA-3'-phosphate cyclase Genomic Order:  545
Name:  ? Brara.J00545 Secondary Identifier:  ? PAC:30612180

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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00545 0.5kb upstream 0.5kb upstream 2333 true A10: 3557482-3559814 Brassica rapa FPsc
Brara.J00545 0.5kb upstream 0.5kb upstream 500 false A10: 3559315-3559814 Brassica rapa FPsc
Brara.J00545 0.5kb downstream 0.5kb downstream 2333 true A10: 3556982-3559314 Brassica rapa FPsc
Brara.J00545 0.5kb downstream 0.5kb downstream 500 false A10: 3556982-3557481 Brassica rapa FPsc
Brara.J00545 1.0kb upstream 1.0kb upstream 2833 true A10: 3557482-3560314 Brassica rapa FPsc
Brara.J00545 1.0kb upstream 1.0kb upstream 1000 false A10: 3559315-3560314 Brassica rapa FPsc
Brara.J00545 1.0kb downstream 1.0kb downstream 2833 true A10: 3556482-3559314 Brassica rapa FPsc
Brara.J00545 1.0kb downstream 1.0kb downstream 1000 false A10: 3556482-3557481 Brassica rapa FPsc
Brara.J00545 2.0kb upstream 2.0kb upstream 3833 true A10: 3557482-3561314 Brassica rapa FPsc
Brara.J00545 2.0kb upstream 2.0kb upstream 2000 false A10: 3559315-3561314 Brassica rapa FPsc
Brara.J00545 2.0kb downstream 2.0kb downstream 3833 true A10: 3555482-3559314 Brassica rapa FPsc
Brara.J00545 2.0kb downstream 2.0kb downstream 2000 false A10: 3555482-3557481 Brassica rapa FPsc
Brara.J00545 5.0kb upstream 5.0kb upstream 6833 true A10: 3557482-3564314 Brassica rapa FPsc
Brara.J00545 5.0kb upstream 5.0kb upstream 5000 false A10: 3559315-3564314 Brassica rapa FPsc
Brara.J00545 5.0kb downstream 5.0kb downstream 6833 true A10: 3552482-3559314 Brassica rapa FPsc
Brara.J00545 5.0kb downstream 5.0kb downstream 5000 false A10: 3552482-3557481 Brassica rapa FPsc
Brara.J00545 10.0kb upstream 10.0kb upstream 11833 true A10: 3557482-3569314 Brassica rapa FPsc
Brara.J00545 10.0kb upstream 10.0kb upstream 10000 false A10: 3559315-3569314 Brassica rapa FPsc
Brara.J00545 10.0kb downstream 10.0kb downstream 11833 true A10: 3547482-3559314 Brassica rapa FPsc
Brara.J00545 10.0kb downstream 10.0kb downstream 10000 false A10: 3547482-3557481 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026420 5273 Angiosperm View MSA
122363198 5261 Brassicaceae View MSA
123831400 5264 Brassicales-Malvales View MSA
124344225 5266 SBM View MSA
124242292 5268 Malvidae View MSA
124066416 5270 Rosid View MSA
123740049 5271 Pentapetalae View MSA
122791939 5272 Eudicot View MSA
121344300 5274 Embryophyte View MSA
123427148 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier