Gene : Brara.C01268 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR31533:SF2 - GPI-ANCHORED PROTEIN LORELEI-RELATED Genomic Order:  1268
Name:  ? Brara.C01268 Secondary Identifier:  ? PAC:30616073
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01268 0.5kb upstream 0.5kb upstream 1872 true A03: 5931265-5933136 Brassica rapa FPsc
Brara.C01268 0.5kb upstream 0.5kb upstream 500 false A03: 5932637-5933136 Brassica rapa FPsc
Brara.C01268 0.5kb downstream 0.5kb downstream 1872 true A03: 5930765-5932636 Brassica rapa FPsc
Brara.C01268 0.5kb downstream 0.5kb downstream 500 false A03: 5930765-5931264 Brassica rapa FPsc
Brara.C01268 1.0kb upstream 1.0kb upstream 2372 true A03: 5931265-5933636 Brassica rapa FPsc
Brara.C01268 1.0kb upstream 1.0kb upstream 1000 false A03: 5932637-5933636 Brassica rapa FPsc
Brara.C01268 1.0kb downstream 1.0kb downstream 2372 true A03: 5930265-5932636 Brassica rapa FPsc
Brara.C01268 1.0kb downstream 1.0kb downstream 1000 false A03: 5930265-5931264 Brassica rapa FPsc
Brara.C01268 2.0kb upstream 2.0kb upstream 3372 true A03: 5931265-5934636 Brassica rapa FPsc
Brara.C01268 2.0kb upstream 2.0kb upstream 2000 false A03: 5932637-5934636 Brassica rapa FPsc
Brara.C01268 2.0kb downstream 2.0kb downstream 3372 true A03: 5929265-5932636 Brassica rapa FPsc
Brara.C01268 2.0kb downstream 2.0kb downstream 2000 false A03: 5929265-5931264 Brassica rapa FPsc
Brara.C01268 5.0kb upstream 5.0kb upstream 6372 true A03: 5931265-5937636 Brassica rapa FPsc
Brara.C01268 5.0kb upstream 5.0kb upstream 5000 false A03: 5932637-5937636 Brassica rapa FPsc
Brara.C01268 5.0kb downstream 5.0kb downstream 6372 true A03: 5926265-5932636 Brassica rapa FPsc
Brara.C01268 5.0kb downstream 5.0kb downstream 5000 false A03: 5926265-5931264 Brassica rapa FPsc
Brara.C01268 10.0kb upstream 10.0kb upstream 11372 true A03: 5931265-5942636 Brassica rapa FPsc
Brara.C01268 10.0kb upstream 10.0kb upstream 10000 false A03: 5932637-5942636 Brassica rapa FPsc
Brara.C01268 10.0kb downstream 10.0kb downstream 11372 true A03: 5921265-5932636 Brassica rapa FPsc
Brara.C01268 10.0kb downstream 10.0kb downstream 10000 false A03: 5921265-5931264 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347106 5261 Brassicaceae Singleton cluster - no MSA
123786688 5264 Brassicales-Malvales Singleton cluster - no MSA
124284788 5266 SBM Singleton cluster - no MSA
124251185 5268 Malvidae View MSA
124072750 5270 Rosid View MSA
123750989 5271 Pentapetalae View MSA
122787745 5272 Eudicot View MSA
122045868 5273 Angiosperm View MSA
121350043 5274 Embryophyte View MSA
123381553 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier