Gene : Brara.J00577 B. rapa FPsc v1.3
Defline:  (1 of 47) PF03108//PF04434//PF10551 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  577
Name:  ? Brara.J00577 Secondary Identifier:  ? PAC:30611466
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00577 0.5kb upstream 0.5kb upstream 4684 true A10: 4130570-4135253 Brassica rapa FPsc
Brara.J00577 0.5kb upstream 0.5kb upstream 500 false A10: 4130570-4131069 Brassica rapa FPsc
Brara.J00577 0.5kb downstream 0.5kb downstream 4684 true A10: 4131070-4135753 Brassica rapa FPsc
Brara.J00577 0.5kb downstream 0.5kb downstream 500 false A10: 4135254-4135753 Brassica rapa FPsc
Brara.J00577 1.0kb upstream 1.0kb upstream 5184 true A10: 4130070-4135253 Brassica rapa FPsc
Brara.J00577 1.0kb upstream 1.0kb upstream 1000 false A10: 4130070-4131069 Brassica rapa FPsc
Brara.J00577 1.0kb downstream 1.0kb downstream 5184 true A10: 4131070-4136253 Brassica rapa FPsc
Brara.J00577 1.0kb downstream 1.0kb downstream 1000 false A10: 4135254-4136253 Brassica rapa FPsc
Brara.J00577 2.0kb upstream 2.0kb upstream 6184 true A10: 4129070-4135253 Brassica rapa FPsc
Brara.J00577 2.0kb upstream 2.0kb upstream 2000 false A10: 4129070-4131069 Brassica rapa FPsc
Brara.J00577 2.0kb downstream 2.0kb downstream 6184 true A10: 4131070-4137253 Brassica rapa FPsc
Brara.J00577 2.0kb downstream 2.0kb downstream 2000 false A10: 4135254-4137253 Brassica rapa FPsc
Brara.J00577 5.0kb upstream 5.0kb upstream 9184 true A10: 4126070-4135253 Brassica rapa FPsc
Brara.J00577 5.0kb upstream 5.0kb upstream 5000 false A10: 4126070-4131069 Brassica rapa FPsc
Brara.J00577 5.0kb downstream 5.0kb downstream 9184 true A10: 4131070-4140253 Brassica rapa FPsc
Brara.J00577 5.0kb downstream 5.0kb downstream 5000 false A10: 4135254-4140253 Brassica rapa FPsc
Brara.J00577 10.0kb upstream 10.0kb upstream 14184 true A10: 4121070-4135253 Brassica rapa FPsc
Brara.J00577 10.0kb upstream 10.0kb upstream 10000 false A10: 4121070-4131069 Brassica rapa FPsc
Brara.J00577 10.0kb downstream 10.0kb downstream 14184 true A10: 4131070-4145253 Brassica rapa FPsc
Brara.J00577 10.0kb downstream 10.0kb downstream 10000 false A10: 4135254-4145253 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380064 5261 Brassicaceae View MSA
123802541 5264 Brassicales-Malvales View MSA
124299729 5266 SBM View MSA
124255746 5268 Malvidae View MSA
124051474 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier