Gene : Brara.E02789 B. rapa FPsc v1.3
Defline:  (1 of 1) PF09668 - Aspartyl protease (Asp_protease) Genomic Order:  2789
Name:  ? Brara.E02789 Secondary Identifier:  ? PAC:30625063
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02789 0.5kb upstream 0.5kb upstream 1882 true A05: 24114598-24116479 Brassica rapa FPsc
Brara.E02789 0.5kb upstream 0.5kb upstream 500 false A05: 24114598-24115097 Brassica rapa FPsc
Brara.E02789 0.5kb downstream 0.5kb downstream 1882 true A05: 24115098-24116979 Brassica rapa FPsc
Brara.E02789 0.5kb downstream 0.5kb downstream 500 false A05: 24116480-24116979 Brassica rapa FPsc
Brara.E02789 1.0kb upstream 1.0kb upstream 2382 true A05: 24114098-24116479 Brassica rapa FPsc
Brara.E02789 1.0kb upstream 1.0kb upstream 1000 false A05: 24114098-24115097 Brassica rapa FPsc
Brara.E02789 1.0kb downstream 1.0kb downstream 2382 true A05: 24115098-24117479 Brassica rapa FPsc
Brara.E02789 1.0kb downstream 1.0kb downstream 1000 false A05: 24116480-24117479 Brassica rapa FPsc
Brara.E02789 2.0kb upstream 2.0kb upstream 3382 true A05: 24113098-24116479 Brassica rapa FPsc
Brara.E02789 2.0kb upstream 2.0kb upstream 2000 false A05: 24113098-24115097 Brassica rapa FPsc
Brara.E02789 2.0kb downstream 2.0kb downstream 3382 true A05: 24115098-24118479 Brassica rapa FPsc
Brara.E02789 2.0kb downstream 2.0kb downstream 2000 false A05: 24116480-24118479 Brassica rapa FPsc
Brara.E02789 5.0kb upstream 5.0kb upstream 6382 true A05: 24110098-24116479 Brassica rapa FPsc
Brara.E02789 5.0kb upstream 5.0kb upstream 5000 false A05: 24110098-24115097 Brassica rapa FPsc
Brara.E02789 5.0kb downstream 5.0kb downstream 6382 true A05: 24115098-24121479 Brassica rapa FPsc
Brara.E02789 5.0kb downstream 5.0kb downstream 5000 false A05: 24116480-24121479 Brassica rapa FPsc
Brara.E02789 10.0kb upstream 10.0kb upstream 11382 true A05: 24105098-24116479 Brassica rapa FPsc
Brara.E02789 10.0kb upstream 10.0kb upstream 10000 false A05: 24105098-24115097 Brassica rapa FPsc
Brara.E02789 10.0kb downstream 10.0kb downstream 11382 true A05: 24115098-24126479 Brassica rapa FPsc
Brara.E02789 10.0kb downstream 10.0kb downstream 10000 false A05: 24116480-24126479 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121505159 5273 Angiosperm Singleton cluster - no MSA
122349512 5261 Brassicaceae Singleton cluster - no MSA
123788689 5264 Brassicales-Malvales Singleton cluster - no MSA
124286710 5266 SBM Singleton cluster - no MSA
124140521 5268 Malvidae Singleton cluster - no MSA
123867725 5270 Rosid Singleton cluster - no MSA
123452536 5271 Pentapetalae Singleton cluster - no MSA
122488022 5272 Eudicot Singleton cluster - no MSA
120778380 5274 Embryophyte Singleton cluster - no MSA
122820570 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

1 Strain

DB identifier