Gene : Brara.E02800 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR23416:SF56 - SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  2800
Name:  ? Brara.E02800 Secondary Identifier:  ? PAC:30627378
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CYSTSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6936 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02800 0.5kb upstream 0.5kb upstream 1981 true A05: 24158138-24160118 Brassica rapa FPsc
Brara.E02800 0.5kb upstream 0.5kb upstream 500 false A05: 24158138-24158637 Brassica rapa FPsc
Brara.E02800 0.5kb downstream 0.5kb downstream 1981 true A05: 24158638-24160618 Brassica rapa FPsc
Brara.E02800 0.5kb downstream 0.5kb downstream 500 false A05: 24160119-24160618 Brassica rapa FPsc
Brara.E02800 1.0kb upstream 1.0kb upstream 2481 true A05: 24157638-24160118 Brassica rapa FPsc
Brara.E02800 1.0kb upstream 1.0kb upstream 1000 false A05: 24157638-24158637 Brassica rapa FPsc
Brara.E02800 1.0kb downstream 1.0kb downstream 2481 true A05: 24158638-24161118 Brassica rapa FPsc
Brara.E02800 1.0kb downstream 1.0kb downstream 1000 false A05: 24160119-24161118 Brassica rapa FPsc
Brara.E02800 2.0kb upstream 2.0kb upstream 3481 true A05: 24156638-24160118 Brassica rapa FPsc
Brara.E02800 2.0kb upstream 2.0kb upstream 2000 false A05: 24156638-24158637 Brassica rapa FPsc
Brara.E02800 2.0kb downstream 2.0kb downstream 3481 true A05: 24158638-24162118 Brassica rapa FPsc
Brara.E02800 2.0kb downstream 2.0kb downstream 2000 false A05: 24160119-24162118 Brassica rapa FPsc
Brara.E02800 5.0kb upstream 5.0kb upstream 6481 true A05: 24153638-24160118 Brassica rapa FPsc
Brara.E02800 5.0kb upstream 5.0kb upstream 5000 false A05: 24153638-24158637 Brassica rapa FPsc
Brara.E02800 5.0kb downstream 5.0kb downstream 6481 true A05: 24158638-24165118 Brassica rapa FPsc
Brara.E02800 5.0kb downstream 5.0kb downstream 5000 false A05: 24160119-24165118 Brassica rapa FPsc
Brara.E02800 10.0kb upstream 10.0kb upstream 11481 true A05: 24148638-24160118 Brassica rapa FPsc
Brara.E02800 10.0kb upstream 10.0kb upstream 10000 false A05: 24148638-24158637 Brassica rapa FPsc
Brara.E02800 10.0kb downstream 10.0kb downstream 11481 true A05: 24158638-24170118 Brassica rapa FPsc
Brara.E02800 10.0kb downstream 10.0kb downstream 10000 false A05: 24160119-24170118 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364131 5261 Brassicaceae View MSA
123835018 5264 Brassicales-Malvales View MSA
124338786 5266 SBM View MSA
124238162 5268 Malvidae View MSA
124069334 5270 Rosid View MSA
123751427 5271 Pentapetalae View MSA
122788280 5272 Eudicot View MSA
122045055 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier