Gene : Brara.J02170 B. rapa FPsc v1.3
Defline:  (1 of 1) 3.5.2.2 - Dihydropyrimidinase / Hydantoinase Genomic Order:  2170
Name:  ? Brara.J02170 Secondary Identifier:  ? PAC:30612767
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3982 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6430 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02170 0.5kb upstream 0.5kb upstream 4282 true A10: 16507550-16511831 Brassica rapa FPsc
Brara.J02170 0.5kb upstream 0.5kb upstream 500 false A10: 16507550-16508049 Brassica rapa FPsc
Brara.J02170 0.5kb downstream 0.5kb downstream 4282 true A10: 16508050-16512331 Brassica rapa FPsc
Brara.J02170 0.5kb downstream 0.5kb downstream 500 false A10: 16511832-16512331 Brassica rapa FPsc
Brara.J02170 1.0kb upstream 1.0kb upstream 4782 true A10: 16507050-16511831 Brassica rapa FPsc
Brara.J02170 1.0kb upstream 1.0kb upstream 1000 false A10: 16507050-16508049 Brassica rapa FPsc
Brara.J02170 1.0kb downstream 1.0kb downstream 4782 true A10: 16508050-16512831 Brassica rapa FPsc
Brara.J02170 1.0kb downstream 1.0kb downstream 1000 false A10: 16511832-16512831 Brassica rapa FPsc
Brara.J02170 2.0kb upstream 2.0kb upstream 5782 true A10: 16506050-16511831 Brassica rapa FPsc
Brara.J02170 2.0kb upstream 2.0kb upstream 2000 false A10: 16506050-16508049 Brassica rapa FPsc
Brara.J02170 2.0kb downstream 2.0kb downstream 5782 true A10: 16508050-16513831 Brassica rapa FPsc
Brara.J02170 2.0kb downstream 2.0kb downstream 2000 false A10: 16511832-16513831 Brassica rapa FPsc
Brara.J02170 5.0kb upstream 5.0kb upstream 8782 true A10: 16503050-16511831 Brassica rapa FPsc
Brara.J02170 5.0kb upstream 5.0kb upstream 5000 false A10: 16503050-16508049 Brassica rapa FPsc
Brara.J02170 5.0kb downstream 5.0kb downstream 8782 true A10: 16508050-16516831 Brassica rapa FPsc
Brara.J02170 5.0kb downstream 5.0kb downstream 5000 false A10: 16511832-16516831 Brassica rapa FPsc
Brara.J02170 10.0kb upstream 10.0kb upstream 13782 true A10: 16498050-16511831 Brassica rapa FPsc
Brara.J02170 10.0kb upstream 10.0kb upstream 10000 false A10: 16498050-16508049 Brassica rapa FPsc
Brara.J02170 10.0kb downstream 10.0kb downstream 13782 true A10: 16508050-16521831 Brassica rapa FPsc
Brara.J02170 10.0kb downstream 10.0kb downstream 10000 false A10: 16511832-16521831 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369486 5261 Brassicaceae View MSA
123828223 5264 Brassicales-Malvales View MSA
124341067 5266 SBM View MSA
124243285 5268 Malvidae View MSA
124064802 5270 Rosid View MSA
123752945 5271 Pentapetalae View MSA
122786753 5272 Eudicot View MSA
122045027 5273 Angiosperm View MSA
121345970 5274 Embryophyte View MSA
123425044 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier