Gene : Brara.J02211 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11614:SF96 - ALPHA/BETA FOLD HYDROLASE FAMILY PROTEIN Genomic Order:  2211
Name:  ? Brara.J02211 Secondary Identifier:  ? PAC:30613360
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7420 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02211 0.5kb upstream 0.5kb upstream 2570 true A10: 16697476-16700045 Brassica rapa FPsc
Brara.J02211 0.5kb upstream 0.5kb upstream 500 false A10: 16699546-16700045 Brassica rapa FPsc
Brara.J02211 0.5kb downstream 0.5kb downstream 2570 true A10: 16696976-16699545 Brassica rapa FPsc
Brara.J02211 0.5kb downstream 0.5kb downstream 500 false A10: 16696976-16697475 Brassica rapa FPsc
Brara.J02211 1.0kb upstream 1.0kb upstream 3070 true A10: 16697476-16700545 Brassica rapa FPsc
Brara.J02211 1.0kb upstream 1.0kb upstream 1000 false A10: 16699546-16700545 Brassica rapa FPsc
Brara.J02211 1.0kb downstream 1.0kb downstream 3070 true A10: 16696476-16699545 Brassica rapa FPsc
Brara.J02211 1.0kb downstream 1.0kb downstream 1000 false A10: 16696476-16697475 Brassica rapa FPsc
Brara.J02211 2.0kb upstream 2.0kb upstream 4070 true A10: 16697476-16701545 Brassica rapa FPsc
Brara.J02211 2.0kb upstream 2.0kb upstream 2000 false A10: 16699546-16701545 Brassica rapa FPsc
Brara.J02211 2.0kb downstream 2.0kb downstream 4070 true A10: 16695476-16699545 Brassica rapa FPsc
Brara.J02211 2.0kb downstream 2.0kb downstream 2000 false A10: 16695476-16697475 Brassica rapa FPsc
Brara.J02211 5.0kb upstream 5.0kb upstream 7070 true A10: 16697476-16704545 Brassica rapa FPsc
Brara.J02211 5.0kb upstream 5.0kb upstream 5000 false A10: 16699546-16704545 Brassica rapa FPsc
Brara.J02211 5.0kb downstream 5.0kb downstream 7070 true A10: 16692476-16699545 Brassica rapa FPsc
Brara.J02211 5.0kb downstream 5.0kb downstream 5000 false A10: 16692476-16697475 Brassica rapa FPsc
Brara.J02211 10.0kb upstream 10.0kb upstream 12070 true A10: 16697476-16709545 Brassica rapa FPsc
Brara.J02211 10.0kb upstream 10.0kb upstream 10000 false A10: 16699546-16709545 Brassica rapa FPsc
Brara.J02211 10.0kb downstream 10.0kb downstream 12070 true A10: 16687476-16699545 Brassica rapa FPsc
Brara.J02211 10.0kb downstream 10.0kb downstream 10000 false A10: 16687476-16697475 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367534 5261 Brassicaceae View MSA
123832405 5264 Brassicales-Malvales View MSA
124351220 5266 SBM View MSA
124247266 5268 Malvidae View MSA
124065565 5270 Rosid View MSA
123753493 5271 Pentapetalae View MSA
122796454 5272 Eudicot View MSA
122051494 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier