Gene : Brara.J01993 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR11926:SF250 - UDP-GLYCOSYLTRANSFERASE 90A1-RELATED Genomic Order:  1993
Name:  ? Brara.J01993 Secondary Identifier:  ? PAC:30614415
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7186 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01993 0.5kb upstream 0.5kb upstream 2366 true A10: 15709053-15711418 Brassica rapa FPsc
Brara.J01993 0.5kb upstream 0.5kb upstream 500 false A10: 15710919-15711418 Brassica rapa FPsc
Brara.J01993 0.5kb downstream 0.5kb downstream 2366 true A10: 15708553-15710918 Brassica rapa FPsc
Brara.J01993 0.5kb downstream 0.5kb downstream 500 false A10: 15708553-15709052 Brassica rapa FPsc
Brara.J01993 1.0kb upstream 1.0kb upstream 2866 true A10: 15709053-15711918 Brassica rapa FPsc
Brara.J01993 1.0kb upstream 1.0kb upstream 1000 false A10: 15710919-15711918 Brassica rapa FPsc
Brara.J01993 1.0kb downstream 1.0kb downstream 2866 true A10: 15708053-15710918 Brassica rapa FPsc
Brara.J01993 1.0kb downstream 1.0kb downstream 1000 false A10: 15708053-15709052 Brassica rapa FPsc
Brara.J01993 2.0kb upstream 2.0kb upstream 3866 true A10: 15709053-15712918 Brassica rapa FPsc
Brara.J01993 2.0kb upstream 2.0kb upstream 2000 false A10: 15710919-15712918 Brassica rapa FPsc
Brara.J01993 2.0kb downstream 2.0kb downstream 3866 true A10: 15707053-15710918 Brassica rapa FPsc
Brara.J01993 2.0kb downstream 2.0kb downstream 2000 false A10: 15707053-15709052 Brassica rapa FPsc
Brara.J01993 5.0kb upstream 5.0kb upstream 6866 true A10: 15709053-15715918 Brassica rapa FPsc
Brara.J01993 5.0kb upstream 5.0kb upstream 5000 false A10: 15710919-15715918 Brassica rapa FPsc
Brara.J01993 5.0kb downstream 5.0kb downstream 6866 true A10: 15704053-15710918 Brassica rapa FPsc
Brara.J01993 5.0kb downstream 5.0kb downstream 5000 false A10: 15704053-15709052 Brassica rapa FPsc
Brara.J01993 10.0kb upstream 10.0kb upstream 11866 true A10: 15709053-15720918 Brassica rapa FPsc
Brara.J01993 10.0kb upstream 10.0kb upstream 10000 false A10: 15710919-15720918 Brassica rapa FPsc
Brara.J01993 10.0kb downstream 10.0kb downstream 11866 true A10: 15699053-15710918 Brassica rapa FPsc
Brara.J01993 10.0kb downstream 10.0kb downstream 10000 false A10: 15699053-15709052 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372421 5261 Brassicaceae View MSA
123841672 5264 Brassicales-Malvales View MSA
124346707 5266 SBM View MSA
124244822 5268 Malvidae View MSA
124061454 5270 Rosid View MSA
123745645 5271 Pentapetalae View MSA
122796365 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier