Gene : Brara.C01961 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.7.7.14 - Ethanolamine-phosphate cytidylyltransferase / Phosphorylethanolamine transferase Genomic Order:  1961
Name:  ? Brara.C01961 Secondary Identifier:  ? PAC:30617835
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY4FS-6 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01961 0.5kb upstream 0.5kb upstream 3446 true A03: 9736194-9739639 Brassica rapa FPsc
Brara.C01961 0.5kb upstream 0.5kb upstream 500 false A03: 9736194-9736693 Brassica rapa FPsc
Brara.C01961 0.5kb downstream 0.5kb downstream 3446 true A03: 9736694-9740139 Brassica rapa FPsc
Brara.C01961 0.5kb downstream 0.5kb downstream 500 false A03: 9739640-9740139 Brassica rapa FPsc
Brara.C01961 1.0kb upstream 1.0kb upstream 3946 true A03: 9735694-9739639 Brassica rapa FPsc
Brara.C01961 1.0kb upstream 1.0kb upstream 1000 false A03: 9735694-9736693 Brassica rapa FPsc
Brara.C01961 1.0kb downstream 1.0kb downstream 3946 true A03: 9736694-9740639 Brassica rapa FPsc
Brara.C01961 1.0kb downstream 1.0kb downstream 1000 false A03: 9739640-9740639 Brassica rapa FPsc
Brara.C01961 2.0kb upstream 2.0kb upstream 4946 true A03: 9734694-9739639 Brassica rapa FPsc
Brara.C01961 2.0kb upstream 2.0kb upstream 2000 false A03: 9734694-9736693 Brassica rapa FPsc
Brara.C01961 2.0kb downstream 2.0kb downstream 4946 true A03: 9736694-9741639 Brassica rapa FPsc
Brara.C01961 2.0kb downstream 2.0kb downstream 2000 false A03: 9739640-9741639 Brassica rapa FPsc
Brara.C01961 5.0kb upstream 5.0kb upstream 7946 true A03: 9731694-9739639 Brassica rapa FPsc
Brara.C01961 5.0kb upstream 5.0kb upstream 5000 false A03: 9731694-9736693 Brassica rapa FPsc
Brara.C01961 5.0kb downstream 5.0kb downstream 7946 true A03: 9736694-9744639 Brassica rapa FPsc
Brara.C01961 5.0kb downstream 5.0kb downstream 5000 false A03: 9739640-9744639 Brassica rapa FPsc
Brara.C01961 10.0kb upstream 10.0kb upstream 12946 true A03: 9726694-9739639 Brassica rapa FPsc
Brara.C01961 10.0kb upstream 10.0kb upstream 10000 false A03: 9726694-9736693 Brassica rapa FPsc
Brara.C01961 10.0kb downstream 10.0kb downstream 12946 true A03: 9736694-9749639 Brassica rapa FPsc
Brara.C01961 10.0kb downstream 10.0kb downstream 10000 false A03: 9739640-9749639 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121504411 5273 Angiosperm Singleton cluster - no MSA
122347610 5261 Brassicaceae Singleton cluster - no MSA
123787105 5264 Brassicales-Malvales Singleton cluster - no MSA
124285192 5266 SBM Singleton cluster - no MSA
124139264 5268 Malvidae Singleton cluster - no MSA
123866678 5270 Rosid Singleton cluster - no MSA
123451666 5271 Pentapetalae Singleton cluster - no MSA
122487169 5272 Eudicot Singleton cluster - no MSA
121349404 5274 Embryophyte View MSA
123426391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier