Gene : Brara.J02012 B. rapa FPsc v1.3
Defline:  (1 of 9) 2.4.1.144 - Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase / acetylglucosaminyltransferase III Genomic Order:  2012
Name:  ? Brara.J02012 Secondary Identifier:  ? PAC:30613723
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7426 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02012 0.5kb upstream 0.5kb upstream 2460 true A10: 15816905-15819364 Brassica rapa FPsc
Brara.J02012 0.5kb upstream 0.5kb upstream 500 false A10: 15818865-15819364 Brassica rapa FPsc
Brara.J02012 0.5kb downstream 0.5kb downstream 2460 true A10: 15816405-15818864 Brassica rapa FPsc
Brara.J02012 0.5kb downstream 0.5kb downstream 500 false A10: 15816405-15816904 Brassica rapa FPsc
Brara.J02012 1.0kb upstream 1.0kb upstream 2960 true A10: 15816905-15819864 Brassica rapa FPsc
Brara.J02012 1.0kb upstream 1.0kb upstream 1000 false A10: 15818865-15819864 Brassica rapa FPsc
Brara.J02012 1.0kb downstream 1.0kb downstream 2960 true A10: 15815905-15818864 Brassica rapa FPsc
Brara.J02012 1.0kb downstream 1.0kb downstream 1000 false A10: 15815905-15816904 Brassica rapa FPsc
Brara.J02012 2.0kb upstream 2.0kb upstream 3960 true A10: 15816905-15820864 Brassica rapa FPsc
Brara.J02012 2.0kb upstream 2.0kb upstream 2000 false A10: 15818865-15820864 Brassica rapa FPsc
Brara.J02012 2.0kb downstream 2.0kb downstream 3960 true A10: 15814905-15818864 Brassica rapa FPsc
Brara.J02012 2.0kb downstream 2.0kb downstream 2000 false A10: 15814905-15816904 Brassica rapa FPsc
Brara.J02012 5.0kb upstream 5.0kb upstream 6960 true A10: 15816905-15823864 Brassica rapa FPsc
Brara.J02012 5.0kb upstream 5.0kb upstream 5000 false A10: 15818865-15823864 Brassica rapa FPsc
Brara.J02012 5.0kb downstream 5.0kb downstream 6960 true A10: 15811905-15818864 Brassica rapa FPsc
Brara.J02012 5.0kb downstream 5.0kb downstream 5000 false A10: 15811905-15816904 Brassica rapa FPsc
Brara.J02012 10.0kb upstream 10.0kb upstream 11960 true A10: 15816905-15828864 Brassica rapa FPsc
Brara.J02012 10.0kb upstream 10.0kb upstream 10000 false A10: 15818865-15828864 Brassica rapa FPsc
Brara.J02012 10.0kb downstream 10.0kb downstream 11960 true A10: 15806905-15818864 Brassica rapa FPsc
Brara.J02012 10.0kb downstream 10.0kb downstream 10000 false A10: 15806905-15816904 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362978 5261 Brassicaceae View MSA
123837423 5264 Brassicales-Malvales View MSA
124342114 5266 SBM View MSA
124250628 5268 Malvidae View MSA
124074833 5270 Rosid View MSA
123745147 5271 Pentapetalae View MSA
122787351 5272 Eudicot View MSA
122044255 5273 Angiosperm View MSA
121351107 5274 Embryophyte View MSA
123424609 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier