Gene : Brara.J01820 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR13040 - AUTOPHAGY PROTEIN 5 Genomic Order:  1820
Name:  ? Brara.J01820 Secondary Identifier:  ? PAC:30612132
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01820 0.5kb upstream 0.5kb upstream 3888 true A10: 14921931-14925818 Brassica rapa FPsc
Brara.J01820 0.5kb upstream 0.5kb upstream 500 false A10: 14921931-14922430 Brassica rapa FPsc
Brara.J01820 0.5kb downstream 0.5kb downstream 3888 true A10: 14922431-14926318 Brassica rapa FPsc
Brara.J01820 0.5kb downstream 0.5kb downstream 500 false A10: 14925819-14926318 Brassica rapa FPsc
Brara.J01820 1.0kb upstream 1.0kb upstream 4388 true A10: 14921431-14925818 Brassica rapa FPsc
Brara.J01820 1.0kb upstream 1.0kb upstream 1000 false A10: 14921431-14922430 Brassica rapa FPsc
Brara.J01820 1.0kb downstream 1.0kb downstream 4388 true A10: 14922431-14926818 Brassica rapa FPsc
Brara.J01820 1.0kb downstream 1.0kb downstream 1000 false A10: 14925819-14926818 Brassica rapa FPsc
Brara.J01820 2.0kb upstream 2.0kb upstream 5388 true A10: 14920431-14925818 Brassica rapa FPsc
Brara.J01820 2.0kb upstream 2.0kb upstream 2000 false A10: 14920431-14922430 Brassica rapa FPsc
Brara.J01820 2.0kb downstream 2.0kb downstream 5388 true A10: 14922431-14927818 Brassica rapa FPsc
Brara.J01820 2.0kb downstream 2.0kb downstream 2000 false A10: 14925819-14927818 Brassica rapa FPsc
Brara.J01820 5.0kb upstream 5.0kb upstream 8388 true A10: 14917431-14925818 Brassica rapa FPsc
Brara.J01820 5.0kb upstream 5.0kb upstream 5000 false A10: 14917431-14922430 Brassica rapa FPsc
Brara.J01820 5.0kb downstream 5.0kb downstream 8388 true A10: 14922431-14930818 Brassica rapa FPsc
Brara.J01820 5.0kb downstream 5.0kb downstream 5000 false A10: 14925819-14930818 Brassica rapa FPsc
Brara.J01820 10.0kb upstream 10.0kb upstream 13388 true A10: 14912431-14925818 Brassica rapa FPsc
Brara.J01820 10.0kb upstream 10.0kb upstream 10000 false A10: 14912431-14922430 Brassica rapa FPsc
Brara.J01820 10.0kb downstream 10.0kb downstream 13388 true A10: 14922431-14935818 Brassica rapa FPsc
Brara.J01820 10.0kb downstream 10.0kb downstream 10000 false A10: 14925819-14935818 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121503824 5273 Angiosperm Singleton cluster - no MSA
122346105 5261 Brassicaceae Singleton cluster - no MSA
123785847 5264 Brassicales-Malvales Singleton cluster - no MSA
124283974 5266 SBM Singleton cluster - no MSA
124138278 5268 Malvidae Singleton cluster - no MSA
123865866 5270 Rosid Singleton cluster - no MSA
123450975 5271 Pentapetalae Singleton cluster - no MSA
122486488 5272 Eudicot Singleton cluster - no MSA
121349357 5274 Embryophyte View MSA
123424338 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier