Gene : Brara.C01993 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR31235:SF43 - PEROXIDASE 24 Genomic Order:  1993
Name:  ? Brara.C01993 Secondary Identifier:  ? PAC:30618756
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5466 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7214 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7445 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01993 0.5kb upstream 0.5kb upstream 3241 true A03: 9864834-9868074 Brassica rapa FPsc
Brara.C01993 0.5kb upstream 0.5kb upstream 500 false A03: 9867575-9868074 Brassica rapa FPsc
Brara.C01993 0.5kb downstream 0.5kb downstream 3241 true A03: 9864334-9867574 Brassica rapa FPsc
Brara.C01993 0.5kb downstream 0.5kb downstream 500 false A03: 9864334-9864833 Brassica rapa FPsc
Brara.C01993 1.0kb upstream 1.0kb upstream 3741 true A03: 9864834-9868574 Brassica rapa FPsc
Brara.C01993 1.0kb upstream 1.0kb upstream 1000 false A03: 9867575-9868574 Brassica rapa FPsc
Brara.C01993 1.0kb downstream 1.0kb downstream 3741 true A03: 9863834-9867574 Brassica rapa FPsc
Brara.C01993 1.0kb downstream 1.0kb downstream 1000 false A03: 9863834-9864833 Brassica rapa FPsc
Brara.C01993 2.0kb upstream 2.0kb upstream 4741 true A03: 9864834-9869574 Brassica rapa FPsc
Brara.C01993 2.0kb upstream 2.0kb upstream 2000 false A03: 9867575-9869574 Brassica rapa FPsc
Brara.C01993 2.0kb downstream 2.0kb downstream 4741 true A03: 9862834-9867574 Brassica rapa FPsc
Brara.C01993 2.0kb downstream 2.0kb downstream 2000 false A03: 9862834-9864833 Brassica rapa FPsc
Brara.C01993 5.0kb upstream 5.0kb upstream 7741 true A03: 9864834-9872574 Brassica rapa FPsc
Brara.C01993 5.0kb upstream 5.0kb upstream 5000 false A03: 9867575-9872574 Brassica rapa FPsc
Brara.C01993 5.0kb downstream 5.0kb downstream 7741 true A03: 9859834-9867574 Brassica rapa FPsc
Brara.C01993 5.0kb downstream 5.0kb downstream 5000 false A03: 9859834-9864833 Brassica rapa FPsc
Brara.C01993 10.0kb upstream 10.0kb upstream 12741 true A03: 9864834-9877574 Brassica rapa FPsc
Brara.C01993 10.0kb upstream 10.0kb upstream 10000 false A03: 9867575-9877574 Brassica rapa FPsc
Brara.C01993 10.0kb downstream 10.0kb downstream 12741 true A03: 9854834-9867574 Brassica rapa FPsc
Brara.C01993 10.0kb downstream 10.0kb downstream 10000 false A03: 9854834-9864833 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366131 5261 Brassicaceae View MSA
123832481 5264 Brassicales-Malvales View MSA
124338577 5266 SBM View MSA
124247065 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier