Gene : Brara.C02009 B. rapa FPsc v1.3
Defline:  (1 of 5) 2.7.8.5 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase / Phosphatidylglycerophosphate synthase Genomic Order:  2009
Name:  ? Brara.C02009 Secondary Identifier:  ? PAC:30617548
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY4FS-7 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5269 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02009 0.5kb upstream 0.5kb upstream 2216 true A03: 9996447-9998662 Brassica rapa FPsc
Brara.C02009 0.5kb upstream 0.5kb upstream 500 false A03: 9996447-9996946 Brassica rapa FPsc
Brara.C02009 0.5kb downstream 0.5kb downstream 2216 true A03: 9996947-9999162 Brassica rapa FPsc
Brara.C02009 0.5kb downstream 0.5kb downstream 500 false A03: 9998663-9999162 Brassica rapa FPsc
Brara.C02009 1.0kb upstream 1.0kb upstream 2716 true A03: 9995947-9998662 Brassica rapa FPsc
Brara.C02009 1.0kb upstream 1.0kb upstream 1000 false A03: 9995947-9996946 Brassica rapa FPsc
Brara.C02009 1.0kb downstream 1.0kb downstream 2716 true A03: 9996947-9999662 Brassica rapa FPsc
Brara.C02009 1.0kb downstream 1.0kb downstream 1000 false A03: 9998663-9999662 Brassica rapa FPsc
Brara.C02009 2.0kb upstream 2.0kb upstream 3716 true A03: 9994947-9998662 Brassica rapa FPsc
Brara.C02009 2.0kb upstream 2.0kb upstream 2000 false A03: 9994947-9996946 Brassica rapa FPsc
Brara.C02009 2.0kb downstream 2.0kb downstream 3716 true A03: 9996947-10000662 Brassica rapa FPsc
Brara.C02009 2.0kb downstream 2.0kb downstream 2000 false A03: 9998663-10000662 Brassica rapa FPsc
Brara.C02009 5.0kb upstream 5.0kb upstream 6716 true A03: 9991947-9998662 Brassica rapa FPsc
Brara.C02009 5.0kb upstream 5.0kb upstream 5000 false A03: 9991947-9996946 Brassica rapa FPsc
Brara.C02009 5.0kb downstream 5.0kb downstream 6716 true A03: 9996947-10003662 Brassica rapa FPsc
Brara.C02009 5.0kb downstream 5.0kb downstream 5000 false A03: 9998663-10003662 Brassica rapa FPsc
Brara.C02009 10.0kb upstream 10.0kb upstream 11716 true A03: 9986947-9998662 Brassica rapa FPsc
Brara.C02009 10.0kb upstream 10.0kb upstream 10000 false A03: 9986947-9996946 Brassica rapa FPsc
Brara.C02009 10.0kb downstream 10.0kb downstream 11716 true A03: 9996947-10008662 Brassica rapa FPsc
Brara.C02009 10.0kb downstream 10.0kb downstream 10000 false A03: 9998663-10008662 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041214 5273 Angiosperm View MSA
122368332 5261 Brassicaceae View MSA
123840403 5264 Brassicales-Malvales View MSA
124340420 5266 SBM View MSA
124250044 5268 Malvidae View MSA
124064050 5270 Rosid View MSA
123750355 5271 Pentapetalae View MSA
122791473 5272 Eudicot View MSA
121349383 5274 Embryophyte View MSA
123424626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier