Gene : Brara.J01873 B. rapa FPsc v1.3
Defline:  (1 of 12) 6.3.1.2 - Glutamate--ammonia ligase / Glutamine synthetase Genomic Order:  1873
Name:  ? Brara.J01873 Secondary Identifier:  ? PAC:30613407
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLNSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3282 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-381 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6549 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6963 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6964 Brassica rapa FPsc pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01873 0.5kb upstream 0.5kb upstream 3238 true A10: 15143297-15146534 Brassica rapa FPsc
Brara.J01873 0.5kb upstream 0.5kb upstream 500 false A10: 15143297-15143796 Brassica rapa FPsc
Brara.J01873 0.5kb downstream 0.5kb downstream 3238 true A10: 15143797-15147034 Brassica rapa FPsc
Brara.J01873 0.5kb downstream 0.5kb downstream 500 false A10: 15146535-15147034 Brassica rapa FPsc
Brara.J01873 1.0kb upstream 1.0kb upstream 3738 true A10: 15142797-15146534 Brassica rapa FPsc
Brara.J01873 1.0kb upstream 1.0kb upstream 1000 false A10: 15142797-15143796 Brassica rapa FPsc
Brara.J01873 1.0kb downstream 1.0kb downstream 3738 true A10: 15143797-15147534 Brassica rapa FPsc
Brara.J01873 1.0kb downstream 1.0kb downstream 1000 false A10: 15146535-15147534 Brassica rapa FPsc
Brara.J01873 2.0kb upstream 2.0kb upstream 4738 true A10: 15141797-15146534 Brassica rapa FPsc
Brara.J01873 2.0kb upstream 2.0kb upstream 2000 false A10: 15141797-15143796 Brassica rapa FPsc
Brara.J01873 2.0kb downstream 2.0kb downstream 4738 true A10: 15143797-15148534 Brassica rapa FPsc
Brara.J01873 2.0kb downstream 2.0kb downstream 2000 false A10: 15146535-15148534 Brassica rapa FPsc
Brara.J01873 5.0kb upstream 5.0kb upstream 7738 true A10: 15138797-15146534 Brassica rapa FPsc
Brara.J01873 5.0kb upstream 5.0kb upstream 5000 false A10: 15138797-15143796 Brassica rapa FPsc
Brara.J01873 5.0kb downstream 5.0kb downstream 7738 true A10: 15143797-15151534 Brassica rapa FPsc
Brara.J01873 5.0kb downstream 5.0kb downstream 5000 false A10: 15146535-15151534 Brassica rapa FPsc
Brara.J01873 10.0kb upstream 10.0kb upstream 12738 true A10: 15133797-15146534 Brassica rapa FPsc
Brara.J01873 10.0kb upstream 10.0kb upstream 10000 false A10: 15133797-15143796 Brassica rapa FPsc
Brara.J01873 10.0kb downstream 10.0kb downstream 12738 true A10: 15143797-15156534 Brassica rapa FPsc
Brara.J01873 10.0kb downstream 10.0kb downstream 10000 false A10: 15146535-15156534 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376853 5261 Brassicaceae View MSA
123841665 5264 Brassicales-Malvales View MSA
124350836 5266 SBM View MSA
124245417 5268 Malvidae View MSA
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier