Gene : Brara.C02026 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN Genomic Order:  2026
Name:  ? Brara.C02026 Secondary Identifier:  ? PAC:30618105
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02026 0.5kb upstream 0.5kb upstream 1957 true A03: 10069145-10071101 Brassica rapa FPsc
Brara.C02026 0.5kb upstream 0.5kb upstream 500 false A03: 10070602-10071101 Brassica rapa FPsc
Brara.C02026 0.5kb downstream 0.5kb downstream 1957 true A03: 10068645-10070601 Brassica rapa FPsc
Brara.C02026 0.5kb downstream 0.5kb downstream 500 false A03: 10068645-10069144 Brassica rapa FPsc
Brara.C02026 1.0kb upstream 1.0kb upstream 2457 true A03: 10069145-10071601 Brassica rapa FPsc
Brara.C02026 1.0kb upstream 1.0kb upstream 1000 false A03: 10070602-10071601 Brassica rapa FPsc
Brara.C02026 1.0kb downstream 1.0kb downstream 2457 true A03: 10068145-10070601 Brassica rapa FPsc
Brara.C02026 1.0kb downstream 1.0kb downstream 1000 false A03: 10068145-10069144 Brassica rapa FPsc
Brara.C02026 2.0kb upstream 2.0kb upstream 3457 true A03: 10069145-10072601 Brassica rapa FPsc
Brara.C02026 2.0kb upstream 2.0kb upstream 2000 false A03: 10070602-10072601 Brassica rapa FPsc
Brara.C02026 2.0kb downstream 2.0kb downstream 3457 true A03: 10067145-10070601 Brassica rapa FPsc
Brara.C02026 2.0kb downstream 2.0kb downstream 2000 false A03: 10067145-10069144 Brassica rapa FPsc
Brara.C02026 5.0kb upstream 5.0kb upstream 6457 true A03: 10069145-10075601 Brassica rapa FPsc
Brara.C02026 5.0kb upstream 5.0kb upstream 5000 false A03: 10070602-10075601 Brassica rapa FPsc
Brara.C02026 5.0kb downstream 5.0kb downstream 6457 true A03: 10064145-10070601 Brassica rapa FPsc
Brara.C02026 5.0kb downstream 5.0kb downstream 5000 false A03: 10064145-10069144 Brassica rapa FPsc
Brara.C02026 10.0kb upstream 10.0kb upstream 11457 true A03: 10069145-10080601 Brassica rapa FPsc
Brara.C02026 10.0kb upstream 10.0kb upstream 10000 false A03: 10070602-10080601 Brassica rapa FPsc
Brara.C02026 10.0kb downstream 10.0kb downstream 11457 true A03: 10059145-10070601 Brassica rapa FPsc
Brara.C02026 10.0kb downstream 10.0kb downstream 10000 false A03: 10059145-10069144 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363386 5261 Brassicaceae View MSA
123838117 5264 Brassicales-Malvales View MSA
124341456 5266 SBM View MSA
124249586 5268 Malvidae View MSA
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier