Gene : Brara.E02659 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR14152 - SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES Genomic Order:  2659
Name:  ? Brara.E02659 Secondary Identifier:  ? PAC:30626908
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02659 0.5kb upstream 0.5kb upstream 1136 true A05: 23313851-23314986 Brassica rapa FPsc
Brara.E02659 0.5kb upstream 0.5kb upstream 500 false A05: 23314487-23314986 Brassica rapa FPsc
Brara.E02659 0.5kb downstream 0.5kb downstream 1136 true A05: 23313351-23314486 Brassica rapa FPsc
Brara.E02659 0.5kb downstream 0.5kb downstream 500 false A05: 23313351-23313850 Brassica rapa FPsc
Brara.E02659 1.0kb upstream 1.0kb upstream 1636 true A05: 23313851-23315486 Brassica rapa FPsc
Brara.E02659 1.0kb upstream 1.0kb upstream 1000 false A05: 23314487-23315486 Brassica rapa FPsc
Brara.E02659 1.0kb downstream 1.0kb downstream 1636 true A05: 23312851-23314486 Brassica rapa FPsc
Brara.E02659 1.0kb downstream 1.0kb downstream 1000 false A05: 23312851-23313850 Brassica rapa FPsc
Brara.E02659 2.0kb upstream 2.0kb upstream 2636 true A05: 23313851-23316486 Brassica rapa FPsc
Brara.E02659 2.0kb upstream 2.0kb upstream 2000 false A05: 23314487-23316486 Brassica rapa FPsc
Brara.E02659 2.0kb downstream 2.0kb downstream 2636 true A05: 23311851-23314486 Brassica rapa FPsc
Brara.E02659 2.0kb downstream 2.0kb downstream 2000 false A05: 23311851-23313850 Brassica rapa FPsc
Brara.E02659 5.0kb upstream 5.0kb upstream 5636 true A05: 23313851-23319486 Brassica rapa FPsc
Brara.E02659 5.0kb upstream 5.0kb upstream 5000 false A05: 23314487-23319486 Brassica rapa FPsc
Brara.E02659 5.0kb downstream 5.0kb downstream 5636 true A05: 23308851-23314486 Brassica rapa FPsc
Brara.E02659 5.0kb downstream 5.0kb downstream 5000 false A05: 23308851-23313850 Brassica rapa FPsc
Brara.E02659 10.0kb upstream 10.0kb upstream 10636 true A05: 23313851-23324486 Brassica rapa FPsc
Brara.E02659 10.0kb upstream 10.0kb upstream 10000 false A05: 23314487-23324486 Brassica rapa FPsc
Brara.E02659 10.0kb downstream 10.0kb downstream 10636 true A05: 23303851-23314486 Brassica rapa FPsc
Brara.E02659 10.0kb downstream 10.0kb downstream 10000 false A05: 23303851-23313850 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027698 5273 Angiosperm View MSA
124149810 5268 Malvidae View MSA
122374163 5261 Brassicaceae View MSA
123800694 5264 Brassicales-Malvales View MSA
124298074 5266 SBM View MSA
123875543 5270 Rosid View MSA
123459344 5271 Pentapetalae View MSA
122494736 5272 Eudicot View MSA
121297317 5274 Embryophyte View MSA
123335386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier