Gene : Brara.C01894 B. rapa FPsc v1.3
Defline:  (1 of 2) 4.1.1.21 - Phosphoribosylaminoimidazole carboxylase / AIR carboxylase Genomic Order:  1894
Name:  ? Brara.C01894 Secondary Identifier:  ? PAC:30619304
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6124 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-841 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01894 0.5kb upstream 0.5kb upstream 4641 true A03: 9363156-9367796 Brassica rapa FPsc
Brara.C01894 0.5kb upstream 0.5kb upstream 500 false A03: 9363156-9363655 Brassica rapa FPsc
Brara.C01894 0.5kb downstream 0.5kb downstream 4641 true A03: 9363656-9368296 Brassica rapa FPsc
Brara.C01894 0.5kb downstream 0.5kb downstream 500 false A03: 9367797-9368296 Brassica rapa FPsc
Brara.C01894 1.0kb upstream 1.0kb upstream 5141 true A03: 9362656-9367796 Brassica rapa FPsc
Brara.C01894 1.0kb upstream 1.0kb upstream 1000 false A03: 9362656-9363655 Brassica rapa FPsc
Brara.C01894 1.0kb downstream 1.0kb downstream 5141 true A03: 9363656-9368796 Brassica rapa FPsc
Brara.C01894 1.0kb downstream 1.0kb downstream 1000 false A03: 9367797-9368796 Brassica rapa FPsc
Brara.C01894 2.0kb upstream 2.0kb upstream 6141 true A03: 9361656-9367796 Brassica rapa FPsc
Brara.C01894 2.0kb upstream 2.0kb upstream 2000 false A03: 9361656-9363655 Brassica rapa FPsc
Brara.C01894 2.0kb downstream 2.0kb downstream 6141 true A03: 9363656-9369796 Brassica rapa FPsc
Brara.C01894 2.0kb downstream 2.0kb downstream 2000 false A03: 9367797-9369796 Brassica rapa FPsc
Brara.C01894 5.0kb upstream 5.0kb upstream 9141 true A03: 9358656-9367796 Brassica rapa FPsc
Brara.C01894 5.0kb upstream 5.0kb upstream 5000 false A03: 9358656-9363655 Brassica rapa FPsc
Brara.C01894 5.0kb downstream 5.0kb downstream 9141 true A03: 9363656-9372796 Brassica rapa FPsc
Brara.C01894 5.0kb downstream 5.0kb downstream 5000 false A03: 9367797-9372796 Brassica rapa FPsc
Brara.C01894 10.0kb upstream 10.0kb upstream 14141 true A03: 9353656-9367796 Brassica rapa FPsc
Brara.C01894 10.0kb upstream 10.0kb upstream 10000 false A03: 9353656-9363655 Brassica rapa FPsc
Brara.C01894 10.0kb downstream 10.0kb downstream 14141 true A03: 9363656-9377796 Brassica rapa FPsc
Brara.C01894 10.0kb downstream 10.0kb downstream 10000 false A03: 9367797-9377796 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348021 5261 Brassicaceae Singleton cluster - no MSA
123787439 5264 Brassicales-Malvales Singleton cluster - no MSA
124285512 5266 SBM Singleton cluster - no MSA
124251478 5268 Malvidae View MSA
124064893 5270 Rosid View MSA
123748384 5271 Pentapetalae View MSA
122790389 5272 Eudicot View MSA
122043847 5273 Angiosperm View MSA
121345366 5274 Embryophyte View MSA
123425127 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier