Gene : Brara.J01643 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR10366:SF362 - ALCOHOL DEHYDROGENASE-RELATED Genomic Order:  1643
Name:  ? Brara.J01643 Secondary Identifier:  ? PAC:30611383
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-361 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01643 0.5kb upstream 0.5kb upstream 2401 true A10: 13913081-13915481 Brassica rapa FPsc
Brara.J01643 0.5kb upstream 0.5kb upstream 500 false A10: 13914982-13915481 Brassica rapa FPsc
Brara.J01643 0.5kb downstream 0.5kb downstream 2401 true A10: 13912581-13914981 Brassica rapa FPsc
Brara.J01643 0.5kb downstream 0.5kb downstream 500 false A10: 13912581-13913080 Brassica rapa FPsc
Brara.J01643 1.0kb upstream 1.0kb upstream 2901 true A10: 13913081-13915981 Brassica rapa FPsc
Brara.J01643 1.0kb upstream 1.0kb upstream 1000 false A10: 13914982-13915981 Brassica rapa FPsc
Brara.J01643 1.0kb downstream 1.0kb downstream 2901 true A10: 13912081-13914981 Brassica rapa FPsc
Brara.J01643 1.0kb downstream 1.0kb downstream 1000 false A10: 13912081-13913080 Brassica rapa FPsc
Brara.J01643 2.0kb upstream 2.0kb upstream 3901 true A10: 13913081-13916981 Brassica rapa FPsc
Brara.J01643 2.0kb upstream 2.0kb upstream 2000 false A10: 13914982-13916981 Brassica rapa FPsc
Brara.J01643 2.0kb downstream 2.0kb downstream 3901 true A10: 13911081-13914981 Brassica rapa FPsc
Brara.J01643 2.0kb downstream 2.0kb downstream 2000 false A10: 13911081-13913080 Brassica rapa FPsc
Brara.J01643 5.0kb upstream 5.0kb upstream 6901 true A10: 13913081-13919981 Brassica rapa FPsc
Brara.J01643 5.0kb upstream 5.0kb upstream 5000 false A10: 13914982-13919981 Brassica rapa FPsc
Brara.J01643 5.0kb downstream 5.0kb downstream 6901 true A10: 13908081-13914981 Brassica rapa FPsc
Brara.J01643 5.0kb downstream 5.0kb downstream 5000 false A10: 13908081-13913080 Brassica rapa FPsc
Brara.J01643 10.0kb upstream 10.0kb upstream 11901 true A10: 13913081-13924981 Brassica rapa FPsc
Brara.J01643 10.0kb upstream 10.0kb upstream 10000 false A10: 13914982-13924981 Brassica rapa FPsc
Brara.J01643 10.0kb downstream 10.0kb downstream 11901 true A10: 13903081-13914981 Brassica rapa FPsc
Brara.J01643 10.0kb downstream 10.0kb downstream 10000 false A10: 13903081-13913080 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364957 5261 Brassicaceae View MSA
123837668 5264 Brassicales-Malvales View MSA
124343860 5266 SBM View MSA
124238633 5268 Malvidae View MSA
124067100 5270 Rosid View MSA
123752094 5271 Pentapetalae View MSA
122797549 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier