Gene : Brara.J01520 B. rapa FPsc v1.3
Defline:  (1 of 5) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Genomic Order:  1520
Name:  ? Brara.J01520 Secondary Identifier:  ? PAC:30611571
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5466 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01520 0.5kb upstream 0.5kb upstream 4746 true A10: 13275301-13280046 Brassica rapa FPsc
Brara.J01520 0.5kb upstream 0.5kb upstream 500 false A10: 13279547-13280046 Brassica rapa FPsc
Brara.J01520 0.5kb downstream 0.5kb downstream 4746 true A10: 13274801-13279546 Brassica rapa FPsc
Brara.J01520 0.5kb downstream 0.5kb downstream 500 false A10: 13274801-13275300 Brassica rapa FPsc
Brara.J01520 1.0kb upstream 1.0kb upstream 5246 true A10: 13275301-13280546 Brassica rapa FPsc
Brara.J01520 1.0kb upstream 1.0kb upstream 1000 false A10: 13279547-13280546 Brassica rapa FPsc
Brara.J01520 1.0kb downstream 1.0kb downstream 5246 true A10: 13274301-13279546 Brassica rapa FPsc
Brara.J01520 1.0kb downstream 1.0kb downstream 1000 false A10: 13274301-13275300 Brassica rapa FPsc
Brara.J01520 2.0kb upstream 2.0kb upstream 6246 true A10: 13275301-13281546 Brassica rapa FPsc
Brara.J01520 2.0kb upstream 2.0kb upstream 2000 false A10: 13279547-13281546 Brassica rapa FPsc
Brara.J01520 2.0kb downstream 2.0kb downstream 6246 true A10: 13273301-13279546 Brassica rapa FPsc
Brara.J01520 2.0kb downstream 2.0kb downstream 2000 false A10: 13273301-13275300 Brassica rapa FPsc
Brara.J01520 5.0kb upstream 5.0kb upstream 9246 true A10: 13275301-13284546 Brassica rapa FPsc
Brara.J01520 5.0kb upstream 5.0kb upstream 5000 false A10: 13279547-13284546 Brassica rapa FPsc
Brara.J01520 5.0kb downstream 5.0kb downstream 9246 true A10: 13270301-13279546 Brassica rapa FPsc
Brara.J01520 5.0kb downstream 5.0kb downstream 5000 false A10: 13270301-13275300 Brassica rapa FPsc
Brara.J01520 10.0kb upstream 10.0kb upstream 14246 true A10: 13275301-13289546 Brassica rapa FPsc
Brara.J01520 10.0kb upstream 10.0kb upstream 10000 false A10: 13279547-13289546 Brassica rapa FPsc
Brara.J01520 10.0kb downstream 10.0kb downstream 14246 true A10: 13265301-13279546 Brassica rapa FPsc
Brara.J01520 10.0kb downstream 10.0kb downstream 10000 false A10: 13265301-13275300 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378805 5261 Brassicaceae View MSA
123833717 5264 Brassicales-Malvales View MSA
124345960 5266 SBM View MSA
124242073 5268 Malvidae View MSA
124063404 5270 Rosid View MSA
123739714 5271 Pentapetalae View MSA
122791263 5272 Eudicot View MSA
122042920 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier