Gene : Brara.J01527 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR21499:SF33 - HOMOSERINE DEHYDROGENASE Genomic Order:  1527
Name:  ? Brara.J01527 Secondary Identifier:  ? PAC:30612709
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc HOMOSERSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3001 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-724 Brassica rapa FPsc pathologic  
BrapaFPsc THRESYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01527 0.5kb upstream 0.5kb upstream 3840 true A10: 13331540-13335379 Brassica rapa FPsc
Brara.J01527 0.5kb upstream 0.5kb upstream 500 false A10: 13331540-13332039 Brassica rapa FPsc
Brara.J01527 0.5kb downstream 0.5kb downstream 3840 true A10: 13332040-13335879 Brassica rapa FPsc
Brara.J01527 0.5kb downstream 0.5kb downstream 500 false A10: 13335380-13335879 Brassica rapa FPsc
Brara.J01527 1.0kb upstream 1.0kb upstream 4340 true A10: 13331040-13335379 Brassica rapa FPsc
Brara.J01527 1.0kb upstream 1.0kb upstream 1000 false A10: 13331040-13332039 Brassica rapa FPsc
Brara.J01527 1.0kb downstream 1.0kb downstream 4340 true A10: 13332040-13336379 Brassica rapa FPsc
Brara.J01527 1.0kb downstream 1.0kb downstream 1000 false A10: 13335380-13336379 Brassica rapa FPsc
Brara.J01527 2.0kb upstream 2.0kb upstream 5340 true A10: 13330040-13335379 Brassica rapa FPsc
Brara.J01527 2.0kb upstream 2.0kb upstream 2000 false A10: 13330040-13332039 Brassica rapa FPsc
Brara.J01527 2.0kb downstream 2.0kb downstream 5340 true A10: 13332040-13337379 Brassica rapa FPsc
Brara.J01527 2.0kb downstream 2.0kb downstream 2000 false A10: 13335380-13337379 Brassica rapa FPsc
Brara.J01527 5.0kb upstream 5.0kb upstream 8340 true A10: 13327040-13335379 Brassica rapa FPsc
Brara.J01527 5.0kb upstream 5.0kb upstream 5000 false A10: 13327040-13332039 Brassica rapa FPsc
Brara.J01527 5.0kb downstream 5.0kb downstream 8340 true A10: 13332040-13340379 Brassica rapa FPsc
Brara.J01527 5.0kb downstream 5.0kb downstream 5000 false A10: 13335380-13340379 Brassica rapa FPsc
Brara.J01527 10.0kb upstream 10.0kb upstream 13340 true A10: 13322040-13335379 Brassica rapa FPsc
Brara.J01527 10.0kb upstream 10.0kb upstream 10000 false A10: 13322040-13332039 Brassica rapa FPsc
Brara.J01527 10.0kb downstream 10.0kb downstream 13340 true A10: 13332040-13345379 Brassica rapa FPsc
Brara.J01527 10.0kb downstream 10.0kb downstream 10000 false A10: 13335380-13345379 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373451 5261 Brassicaceae View MSA
123833269 5264 Brassicales-Malvales View MSA
124336802 5266 SBM View MSA
124242430 5268 Malvidae View MSA
124062775 5270 Rosid View MSA
123740432 5271 Pentapetalae View MSA
122769980 5272 Eudicot View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier