Gene : Brara.J01571 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10168:SF112 - GLUTAREDOXIN-C4 Genomic Order:  1571
Name:  ? Brara.J01571 Secondary Identifier:  ? PAC:30611594
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc THIOREDOX-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01571 0.5kb upstream 0.5kb upstream 2091 true A10: 13591229-13593319 Brassica rapa FPsc
Brara.J01571 0.5kb upstream 0.5kb upstream 500 false A10: 13592820-13593319 Brassica rapa FPsc
Brara.J01571 0.5kb downstream 0.5kb downstream 2091 true A10: 13590729-13592819 Brassica rapa FPsc
Brara.J01571 0.5kb downstream 0.5kb downstream 500 false A10: 13590729-13591228 Brassica rapa FPsc
Brara.J01571 1.0kb upstream 1.0kb upstream 2591 true A10: 13591229-13593819 Brassica rapa FPsc
Brara.J01571 1.0kb upstream 1.0kb upstream 1000 false A10: 13592820-13593819 Brassica rapa FPsc
Brara.J01571 1.0kb downstream 1.0kb downstream 2591 true A10: 13590229-13592819 Brassica rapa FPsc
Brara.J01571 1.0kb downstream 1.0kb downstream 1000 false A10: 13590229-13591228 Brassica rapa FPsc
Brara.J01571 2.0kb upstream 2.0kb upstream 3591 true A10: 13591229-13594819 Brassica rapa FPsc
Brara.J01571 2.0kb upstream 2.0kb upstream 2000 false A10: 13592820-13594819 Brassica rapa FPsc
Brara.J01571 2.0kb downstream 2.0kb downstream 3591 true A10: 13589229-13592819 Brassica rapa FPsc
Brara.J01571 2.0kb downstream 2.0kb downstream 2000 false A10: 13589229-13591228 Brassica rapa FPsc
Brara.J01571 5.0kb upstream 5.0kb upstream 6591 true A10: 13591229-13597819 Brassica rapa FPsc
Brara.J01571 5.0kb upstream 5.0kb upstream 5000 false A10: 13592820-13597819 Brassica rapa FPsc
Brara.J01571 5.0kb downstream 5.0kb downstream 6591 true A10: 13586229-13592819 Brassica rapa FPsc
Brara.J01571 5.0kb downstream 5.0kb downstream 5000 false A10: 13586229-13591228 Brassica rapa FPsc
Brara.J01571 10.0kb upstream 10.0kb upstream 11591 true A10: 13591229-13602819 Brassica rapa FPsc
Brara.J01571 10.0kb upstream 10.0kb upstream 10000 false A10: 13592820-13602819 Brassica rapa FPsc
Brara.J01571 10.0kb downstream 10.0kb downstream 11591 true A10: 13581229-13592819 Brassica rapa FPsc
Brara.J01571 10.0kb downstream 10.0kb downstream 10000 false A10: 13581229-13591228 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345987 5261 Brassicaceae Singleton cluster - no MSA
123785743 5264 Brassicales-Malvales Singleton cluster - no MSA
124283874 5266 SBM Singleton cluster - no MSA
124251617 5268 Malvidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier