Gene : Brara.C01711 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31500:SF0 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  1711
Name:  ? Brara.C01711 Secondary Identifier:  ? PAC:30619452
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01711 0.5kb upstream 0.5kb upstream 3461 true A03: 8375134-8378594 Brassica rapa FPsc
Brara.C01711 0.5kb upstream 0.5kb upstream 500 false A03: 8375134-8375633 Brassica rapa FPsc
Brara.C01711 0.5kb downstream 0.5kb downstream 3461 true A03: 8375634-8379094 Brassica rapa FPsc
Brara.C01711 0.5kb downstream 0.5kb downstream 500 false A03: 8378595-8379094 Brassica rapa FPsc
Brara.C01711 1.0kb upstream 1.0kb upstream 3961 true A03: 8374634-8378594 Brassica rapa FPsc
Brara.C01711 1.0kb upstream 1.0kb upstream 1000 false A03: 8374634-8375633 Brassica rapa FPsc
Brara.C01711 1.0kb downstream 1.0kb downstream 3961 true A03: 8375634-8379594 Brassica rapa FPsc
Brara.C01711 1.0kb downstream 1.0kb downstream 1000 false A03: 8378595-8379594 Brassica rapa FPsc
Brara.C01711 2.0kb upstream 2.0kb upstream 4961 true A03: 8373634-8378594 Brassica rapa FPsc
Brara.C01711 2.0kb upstream 2.0kb upstream 2000 false A03: 8373634-8375633 Brassica rapa FPsc
Brara.C01711 2.0kb downstream 2.0kb downstream 4961 true A03: 8375634-8380594 Brassica rapa FPsc
Brara.C01711 2.0kb downstream 2.0kb downstream 2000 false A03: 8378595-8380594 Brassica rapa FPsc
Brara.C01711 5.0kb upstream 5.0kb upstream 7961 true A03: 8370634-8378594 Brassica rapa FPsc
Brara.C01711 5.0kb upstream 5.0kb upstream 5000 false A03: 8370634-8375633 Brassica rapa FPsc
Brara.C01711 5.0kb downstream 5.0kb downstream 7961 true A03: 8375634-8383594 Brassica rapa FPsc
Brara.C01711 5.0kb downstream 5.0kb downstream 5000 false A03: 8378595-8383594 Brassica rapa FPsc
Brara.C01711 10.0kb upstream 10.0kb upstream 12961 true A03: 8365634-8378594 Brassica rapa FPsc
Brara.C01711 10.0kb upstream 10.0kb upstream 10000 false A03: 8365634-8375633 Brassica rapa FPsc
Brara.C01711 10.0kb downstream 10.0kb downstream 12961 true A03: 8375634-8388594 Brassica rapa FPsc
Brara.C01711 10.0kb downstream 10.0kb downstream 10000 false A03: 8378595-8388594 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348063 5261 Brassicaceae Singleton cluster - no MSA
123787474 5264 Brassicales-Malvales Singleton cluster - no MSA
124285547 5266 SBM Singleton cluster - no MSA
124139562 5268 Malvidae Singleton cluster - no MSA
124069070 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier