Gene : Brara.J01405 B. rapa FPsc v1.3
Defline:  (1 of 11) PF06830 - Root cap (Root_cap) Genomic Order:  1405
Name:  ? Brara.J01405 Secondary Identifier:  ? PAC:30612660
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01405 0.5kb upstream 0.5kb upstream 1726 true A10: 12465657-12467382 Brassica rapa FPsc
Brara.J01405 0.5kb upstream 0.5kb upstream 500 false A10: 12466883-12467382 Brassica rapa FPsc
Brara.J01405 0.5kb downstream 0.5kb downstream 1726 true A10: 12465157-12466882 Brassica rapa FPsc
Brara.J01405 0.5kb downstream 0.5kb downstream 500 false A10: 12465157-12465656 Brassica rapa FPsc
Brara.J01405 1.0kb upstream 1.0kb upstream 2226 true A10: 12465657-12467882 Brassica rapa FPsc
Brara.J01405 1.0kb upstream 1.0kb upstream 1000 false A10: 12466883-12467882 Brassica rapa FPsc
Brara.J01405 1.0kb downstream 1.0kb downstream 2226 true A10: 12464657-12466882 Brassica rapa FPsc
Brara.J01405 1.0kb downstream 1.0kb downstream 1000 false A10: 12464657-12465656 Brassica rapa FPsc
Brara.J01405 2.0kb upstream 2.0kb upstream 3226 true A10: 12465657-12468882 Brassica rapa FPsc
Brara.J01405 2.0kb upstream 2.0kb upstream 2000 false A10: 12466883-12468882 Brassica rapa FPsc
Brara.J01405 2.0kb downstream 2.0kb downstream 3226 true A10: 12463657-12466882 Brassica rapa FPsc
Brara.J01405 2.0kb downstream 2.0kb downstream 2000 false A10: 12463657-12465656 Brassica rapa FPsc
Brara.J01405 5.0kb upstream 5.0kb upstream 6226 true A10: 12465657-12471882 Brassica rapa FPsc
Brara.J01405 5.0kb upstream 5.0kb upstream 5000 false A10: 12466883-12471882 Brassica rapa FPsc
Brara.J01405 5.0kb downstream 5.0kb downstream 6226 true A10: 12460657-12466882 Brassica rapa FPsc
Brara.J01405 5.0kb downstream 5.0kb downstream 5000 false A10: 12460657-12465656 Brassica rapa FPsc
Brara.J01405 10.0kb upstream 10.0kb upstream 11226 true A10: 12465657-12476882 Brassica rapa FPsc
Brara.J01405 10.0kb upstream 10.0kb upstream 10000 false A10: 12466883-12476882 Brassica rapa FPsc
Brara.J01405 10.0kb downstream 10.0kb downstream 11226 true A10: 12455657-12466882 Brassica rapa FPsc
Brara.J01405 10.0kb downstream 10.0kb downstream 10000 false A10: 12455657-12465656 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372660 5261 Brassicaceae View MSA
123835424 5264 Brassicales-Malvales View MSA
124343378 5266 SBM View MSA
124246752 5268 Malvidae View MSA
124061597 5270 Rosid View MSA
123752203 5271 Pentapetalae View MSA
122797654 5272 Eudicot View MSA
122050447 5273 Angiosperm View MSA
121349873 5274 Embryophyte View MSA
123381481 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier