Gene : Brara.J01406 B. rapa FPsc v1.3
Defline:  (1 of 11) PF06830 - Root cap (Root_cap) Genomic Order:  1406
Name:  ? Brara.J01406 Secondary Identifier:  ? PAC:30613685
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01406 0.5kb upstream 0.5kb upstream 2242 true A10: 12467874-12470115 Brassica rapa FPsc
Brara.J01406 0.5kb upstream 0.5kb upstream 500 false A10: 12469616-12470115 Brassica rapa FPsc
Brara.J01406 0.5kb downstream 0.5kb downstream 2242 true A10: 12467374-12469615 Brassica rapa FPsc
Brara.J01406 0.5kb downstream 0.5kb downstream 500 false A10: 12467374-12467873 Brassica rapa FPsc
Brara.J01406 1.0kb upstream 1.0kb upstream 2742 true A10: 12467874-12470615 Brassica rapa FPsc
Brara.J01406 1.0kb upstream 1.0kb upstream 1000 false A10: 12469616-12470615 Brassica rapa FPsc
Brara.J01406 1.0kb downstream 1.0kb downstream 2742 true A10: 12466874-12469615 Brassica rapa FPsc
Brara.J01406 1.0kb downstream 1.0kb downstream 1000 false A10: 12466874-12467873 Brassica rapa FPsc
Brara.J01406 2.0kb upstream 2.0kb upstream 3742 true A10: 12467874-12471615 Brassica rapa FPsc
Brara.J01406 2.0kb upstream 2.0kb upstream 2000 false A10: 12469616-12471615 Brassica rapa FPsc
Brara.J01406 2.0kb downstream 2.0kb downstream 3742 true A10: 12465874-12469615 Brassica rapa FPsc
Brara.J01406 2.0kb downstream 2.0kb downstream 2000 false A10: 12465874-12467873 Brassica rapa FPsc
Brara.J01406 5.0kb upstream 5.0kb upstream 6742 true A10: 12467874-12474615 Brassica rapa FPsc
Brara.J01406 5.0kb upstream 5.0kb upstream 5000 false A10: 12469616-12474615 Brassica rapa FPsc
Brara.J01406 5.0kb downstream 5.0kb downstream 6742 true A10: 12462874-12469615 Brassica rapa FPsc
Brara.J01406 5.0kb downstream 5.0kb downstream 5000 false A10: 12462874-12467873 Brassica rapa FPsc
Brara.J01406 10.0kb upstream 10.0kb upstream 11742 true A10: 12467874-12479615 Brassica rapa FPsc
Brara.J01406 10.0kb upstream 10.0kb upstream 10000 false A10: 12469616-12479615 Brassica rapa FPsc
Brara.J01406 10.0kb downstream 10.0kb downstream 11742 true A10: 12457874-12469615 Brassica rapa FPsc
Brara.J01406 10.0kb downstream 10.0kb downstream 10000 false A10: 12457874-12467873 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378455 5261 Brassicaceae View MSA
123835508 5264 Brassicales-Malvales View MSA
124343084 5266 SBM View MSA
124246752 5268 Malvidae View MSA
124061597 5270 Rosid View MSA
123752203 5271 Pentapetalae View MSA
122797654 5272 Eudicot View MSA
122050447 5273 Angiosperm View MSA
121349873 5274 Embryophyte View MSA
123381481 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier