Gene : Brara.C02501 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR22950//PTHR22950:SF242 - AMINO ACID TRANSPORTER Genomic Order:  2501
Name:  ? Brara.C02501 Secondary Identifier:  ? PAC:30615596
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02501 0.5kb upstream 0.5kb upstream 3082 true A03: 12607929-12611010 Brassica rapa FPsc
Brara.C02501 0.5kb upstream 0.5kb upstream 500 false A03: 12610511-12611010 Brassica rapa FPsc
Brara.C02501 0.5kb downstream 0.5kb downstream 3082 true A03: 12607429-12610510 Brassica rapa FPsc
Brara.C02501 0.5kb downstream 0.5kb downstream 500 false A03: 12607429-12607928 Brassica rapa FPsc
Brara.C02501 1.0kb upstream 1.0kb upstream 3582 true A03: 12607929-12611510 Brassica rapa FPsc
Brara.C02501 1.0kb upstream 1.0kb upstream 1000 false A03: 12610511-12611510 Brassica rapa FPsc
Brara.C02501 1.0kb downstream 1.0kb downstream 3582 true A03: 12606929-12610510 Brassica rapa FPsc
Brara.C02501 1.0kb downstream 1.0kb downstream 1000 false A03: 12606929-12607928 Brassica rapa FPsc
Brara.C02501 2.0kb upstream 2.0kb upstream 4582 true A03: 12607929-12612510 Brassica rapa FPsc
Brara.C02501 2.0kb upstream 2.0kb upstream 2000 false A03: 12610511-12612510 Brassica rapa FPsc
Brara.C02501 2.0kb downstream 2.0kb downstream 4582 true A03: 12605929-12610510 Brassica rapa FPsc
Brara.C02501 2.0kb downstream 2.0kb downstream 2000 false A03: 12605929-12607928 Brassica rapa FPsc
Brara.C02501 5.0kb upstream 5.0kb upstream 7582 true A03: 12607929-12615510 Brassica rapa FPsc
Brara.C02501 5.0kb upstream 5.0kb upstream 5000 false A03: 12610511-12615510 Brassica rapa FPsc
Brara.C02501 5.0kb downstream 5.0kb downstream 7582 true A03: 12602929-12610510 Brassica rapa FPsc
Brara.C02501 5.0kb downstream 5.0kb downstream 5000 false A03: 12602929-12607928 Brassica rapa FPsc
Brara.C02501 10.0kb upstream 10.0kb upstream 12582 true A03: 12607929-12620510 Brassica rapa FPsc
Brara.C02501 10.0kb upstream 10.0kb upstream 10000 false A03: 12610511-12620510 Brassica rapa FPsc
Brara.C02501 10.0kb downstream 10.0kb downstream 12582 true A03: 12597929-12610510 Brassica rapa FPsc
Brara.C02501 10.0kb downstream 10.0kb downstream 10000 false A03: 12597929-12607928 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346979 5261 Brassicaceae Singleton cluster - no MSA
123786583 5264 Brassicales-Malvales Singleton cluster - no MSA
124284685 5266 SBM Singleton cluster - no MSA
124255759 5268 Malvidae View MSA
124073275 5270 Rosid View MSA
123753033 5271 Pentapetalae View MSA
122796609 5272 Eudicot View MSA
122045744 5273 Angiosperm View MSA
121347395 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier