Gene : Brara.E03043 B. rapa FPsc v1.3
Defline:  (1 of 4) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  3043
Name:  ? Brara.E03043 Secondary Identifier:  ? PAC:30626735
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc BRANCHED-CHAIN-AA-SYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ILEUSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3001 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03043 0.5kb upstream 0.5kb upstream 3697 true A05: 25340314-25344010 Brassica rapa FPsc
Brara.E03043 0.5kb upstream 0.5kb upstream 500 false A05: 25340314-25340813 Brassica rapa FPsc
Brara.E03043 0.5kb downstream 0.5kb downstream 3697 true A05: 25340814-25344510 Brassica rapa FPsc
Brara.E03043 0.5kb downstream 0.5kb downstream 500 false A05: 25344011-25344510 Brassica rapa FPsc
Brara.E03043 1.0kb upstream 1.0kb upstream 4197 true A05: 25339814-25344010 Brassica rapa FPsc
Brara.E03043 1.0kb upstream 1.0kb upstream 1000 false A05: 25339814-25340813 Brassica rapa FPsc
Brara.E03043 1.0kb downstream 1.0kb downstream 4197 true A05: 25340814-25345010 Brassica rapa FPsc
Brara.E03043 1.0kb downstream 1.0kb downstream 1000 false A05: 25344011-25345010 Brassica rapa FPsc
Brara.E03043 2.0kb upstream 2.0kb upstream 5197 true A05: 25338814-25344010 Brassica rapa FPsc
Brara.E03043 2.0kb upstream 2.0kb upstream 2000 false A05: 25338814-25340813 Brassica rapa FPsc
Brara.E03043 2.0kb downstream 2.0kb downstream 5197 true A05: 25340814-25346010 Brassica rapa FPsc
Brara.E03043 2.0kb downstream 2.0kb downstream 2000 false A05: 25344011-25346010 Brassica rapa FPsc
Brara.E03043 5.0kb upstream 5.0kb upstream 8197 true A05: 25335814-25344010 Brassica rapa FPsc
Brara.E03043 5.0kb upstream 5.0kb upstream 5000 false A05: 25335814-25340813 Brassica rapa FPsc
Brara.E03043 5.0kb downstream 5.0kb downstream 8197 true A05: 25340814-25349010 Brassica rapa FPsc
Brara.E03043 5.0kb downstream 5.0kb downstream 5000 false A05: 25344011-25349010 Brassica rapa FPsc
Brara.E03043 10.0kb upstream 10.0kb upstream 13197 true A05: 25330814-25344010 Brassica rapa FPsc
Brara.E03043 10.0kb upstream 10.0kb upstream 10000 false A05: 25330814-25340813 Brassica rapa FPsc
Brara.E03043 10.0kb downstream 10.0kb downstream 13197 true A05: 25340814-25354010 Brassica rapa FPsc
Brara.E03043 10.0kb downstream 10.0kb downstream 10000 false A05: 25344011-25354010 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
122377421 5261 Brassicaceae View MSA
123831169 5264 Brassicales-Malvales View MSA
124337828 5266 SBM View MSA
124240425 5268 Malvidae View MSA
124062087 5270 Rosid View MSA
123737037 5271 Pentapetalae View MSA
122787691 5272 Eudicot View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier