Gene : Brara.K00208 B. rapa FPsc v1.3
Defline:  (1 of 1) 1.2.1.12//1.2.1.13 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) / Triosephosphate dehydrogenase // Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) / Triosephosphate dehydrogenase (NADP+) Genomic Order:  1
Name:  ? Brara.K00208 Secondary Identifier:  ? PAC:30646955
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ANAEROFRUCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ANAGLYCOLYSIS-PWY Brassica rapa FPsc pathologic  
BrapaFPsc CALVIN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLUCONEO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-1042 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-399 Brassica rapa FPsc pathologic  
BrapaFPsc SUCSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00208 0.5kb upstream 0.5kb upstream 1976 true Scaffold11282: 9-1984 Brassica rapa FPsc
Brara.K00208 0.5kb upstream 0.5kb upstream 168 false Scaffold11282: 1817-1984 Brassica rapa FPsc
Brara.K00208 0.5kb downstream 0.5kb downstream 1816 true Scaffold11282: 1-1816 Brassica rapa FPsc
Brara.K00208 0.5kb downstream 0.5kb downstream 8 false Scaffold11282: 1-8 Brassica rapa FPsc
Brara.K00208 1.0kb upstream 1.0kb upstream 1976 true Scaffold11282: 9-1984 Brassica rapa FPsc
Brara.K00208 1.0kb upstream 1.0kb upstream 168 false Scaffold11282: 1817-1984 Brassica rapa FPsc
Brara.K00208 1.0kb downstream 1.0kb downstream 1816 true Scaffold11282: 1-1816 Brassica rapa FPsc
Brara.K00208 1.0kb downstream 1.0kb downstream 8 false Scaffold11282: 1-8 Brassica rapa FPsc
Brara.K00208 2.0kb upstream 2.0kb upstream 1976 true Scaffold11282: 9-1984 Brassica rapa FPsc
Brara.K00208 2.0kb upstream 2.0kb upstream 168 false Scaffold11282: 1817-1984 Brassica rapa FPsc
Brara.K00208 2.0kb downstream 2.0kb downstream 1816 true Scaffold11282: 1-1816 Brassica rapa FPsc
Brara.K00208 2.0kb downstream 2.0kb downstream 8 false Scaffold11282: 1-8 Brassica rapa FPsc
Brara.K00208 5.0kb upstream 5.0kb upstream 1976 true Scaffold11282: 9-1984 Brassica rapa FPsc
Brara.K00208 5.0kb upstream 5.0kb upstream 168 false Scaffold11282: 1817-1984 Brassica rapa FPsc
Brara.K00208 5.0kb downstream 5.0kb downstream 1816 true Scaffold11282: 1-1816 Brassica rapa FPsc
Brara.K00208 5.0kb downstream 5.0kb downstream 8 false Scaffold11282: 1-8 Brassica rapa FPsc
Brara.K00208 10.0kb upstream 10.0kb upstream 1976 true Scaffold11282: 9-1984 Brassica rapa FPsc
Brara.K00208 10.0kb upstream 10.0kb upstream 168 false Scaffold11282: 1817-1984 Brassica rapa FPsc
Brara.K00208 10.0kb downstream 10.0kb downstream 1816 true Scaffold11282: 1-1816 Brassica rapa FPsc
Brara.K00208 10.0kb downstream 10.0kb downstream 8 false Scaffold11282: 1-8 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360412 5261 Brassicaceae View MSA
123837960 5264 Brassicales-Malvales View MSA
124344179 5266 SBM View MSA
124254162 5268 Malvidae View MSA
124061607 5270 Rosid View MSA
123737488 5271 Pentapetalae View MSA
122795007 5272 Eudicot View MSA
122045489 5273 Angiosperm View MSA
121346351 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier