Gene : Brara.K01876 B. rapa FPsc v1.3

Defline:  (1 of 2) KOG3420 - Predicted RNA methylase Genomic Order:  9
Name:  ? Brara.K01876 Secondary Identifier:  ? PAC:30611132

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01876 0.5kb upstream 0.5kb upstream 1697 true Scaffold8989: 78078-79774 Brassica rapa FPsc
Brara.K01876 0.5kb upstream 0.5kb upstream 500 false Scaffold8989: 79275-79774 Brassica rapa FPsc
Brara.K01876 0.5kb downstream 0.5kb downstream 1697 true Scaffold8989: 77578-79274 Brassica rapa FPsc
Brara.K01876 0.5kb downstream 0.5kb downstream 500 false Scaffold8989: 77578-78077 Brassica rapa FPsc
Brara.K01876 1.0kb upstream 1.0kb upstream 2197 true Scaffold8989: 78078-80274 Brassica rapa FPsc
Brara.K01876 1.0kb upstream 1.0kb upstream 1000 false Scaffold8989: 79275-80274 Brassica rapa FPsc
Brara.K01876 1.0kb downstream 1.0kb downstream 2197 true Scaffold8989: 77078-79274 Brassica rapa FPsc
Brara.K01876 1.0kb downstream 1.0kb downstream 1000 false Scaffold8989: 77078-78077 Brassica rapa FPsc
Brara.K01876 2.0kb upstream 2.0kb upstream 3197 true Scaffold8989: 78078-81274 Brassica rapa FPsc
Brara.K01876 2.0kb upstream 2.0kb upstream 2000 false Scaffold8989: 79275-81274 Brassica rapa FPsc
Brara.K01876 2.0kb downstream 2.0kb downstream 3197 true Scaffold8989: 76078-79274 Brassica rapa FPsc
Brara.K01876 2.0kb downstream 2.0kb downstream 2000 false Scaffold8989: 76078-78077 Brassica rapa FPsc
Brara.K01876 5.0kb upstream 5.0kb upstream 6197 true Scaffold8989: 78078-84274 Brassica rapa FPsc
Brara.K01876 5.0kb upstream 5.0kb upstream 5000 false Scaffold8989: 79275-84274 Brassica rapa FPsc
Brara.K01876 5.0kb downstream 5.0kb downstream 6197 true Scaffold8989: 73078-79274 Brassica rapa FPsc
Brara.K01876 5.0kb downstream 5.0kb downstream 5000 false Scaffold8989: 73078-78077 Brassica rapa FPsc
Brara.K01876 10.0kb upstream 10.0kb upstream 11197 true Scaffold8989: 78078-89274 Brassica rapa FPsc
Brara.K01876 10.0kb upstream 10.0kb upstream 10000 false Scaffold8989: 79275-89274 Brassica rapa FPsc
Brara.K01876 10.0kb downstream 10.0kb downstream 11197 true Scaffold8989: 68078-79274 Brassica rapa FPsc
Brara.K01876 10.0kb downstream 10.0kb downstream 10000 false Scaffold8989: 68078-78077 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369680 5261 Brassicaceae View MSA
123828406 5264 Brassicales-Malvales View MSA
124341818 5266 SBM View MSA
124243569 5268 Malvidae View MSA
124063475 5270 Rosid View MSA
123737429 5271 Pentapetalae View MSA
122790972 5272 Eudicot View MSA
122044343 5273 Angiosperm View MSA
121351641 5274 Embryophyte View MSA
123425114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier