Gene : Brara.K01872 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31413:SF2 - AFP HOMOLOG 2 Genomic Order:  5
Name:  ? Brara.K01872 Secondary Identifier:  ? PAC:30611131
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01872 0.5kb upstream 0.5kb upstream 1722 true Scaffold8989: 50524-52245 Brassica rapa FPsc
Brara.K01872 0.5kb upstream 0.5kb upstream 500 false Scaffold8989: 50524-51023 Brassica rapa FPsc
Brara.K01872 0.5kb downstream 0.5kb downstream 1722 true Scaffold8989: 51024-52745 Brassica rapa FPsc
Brara.K01872 0.5kb downstream 0.5kb downstream 500 false Scaffold8989: 52246-52745 Brassica rapa FPsc
Brara.K01872 1.0kb upstream 1.0kb upstream 2222 true Scaffold8989: 50024-52245 Brassica rapa FPsc
Brara.K01872 1.0kb upstream 1.0kb upstream 1000 false Scaffold8989: 50024-51023 Brassica rapa FPsc
Brara.K01872 1.0kb downstream 1.0kb downstream 2222 true Scaffold8989: 51024-53245 Brassica rapa FPsc
Brara.K01872 1.0kb downstream 1.0kb downstream 1000 false Scaffold8989: 52246-53245 Brassica rapa FPsc
Brara.K01872 2.0kb upstream 2.0kb upstream 3222 true Scaffold8989: 49024-52245 Brassica rapa FPsc
Brara.K01872 2.0kb upstream 2.0kb upstream 2000 false Scaffold8989: 49024-51023 Brassica rapa FPsc
Brara.K01872 2.0kb downstream 2.0kb downstream 3222 true Scaffold8989: 51024-54245 Brassica rapa FPsc
Brara.K01872 2.0kb downstream 2.0kb downstream 2000 false Scaffold8989: 52246-54245 Brassica rapa FPsc
Brara.K01872 5.0kb upstream 5.0kb upstream 6222 true Scaffold8989: 46024-52245 Brassica rapa FPsc
Brara.K01872 5.0kb upstream 5.0kb upstream 5000 false Scaffold8989: 46024-51023 Brassica rapa FPsc
Brara.K01872 5.0kb downstream 5.0kb downstream 6222 true Scaffold8989: 51024-57245 Brassica rapa FPsc
Brara.K01872 5.0kb downstream 5.0kb downstream 5000 false Scaffold8989: 52246-57245 Brassica rapa FPsc
Brara.K01872 10.0kb upstream 10.0kb upstream 11222 true Scaffold8989: 41024-52245 Brassica rapa FPsc
Brara.K01872 10.0kb upstream 10.0kb upstream 10000 false Scaffold8989: 41024-51023 Brassica rapa FPsc
Brara.K01872 10.0kb downstream 10.0kb downstream 11222 true Scaffold8989: 51024-62245 Brassica rapa FPsc
Brara.K01872 10.0kb downstream 10.0kb downstream 10000 false Scaffold8989: 52246-62245 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345862 5261 Brassicaceae Singleton cluster - no MSA
123785640 5264 Brassicales-Malvales Singleton cluster - no MSA
124283774 5266 SBM Singleton cluster - no MSA
124138115 5268 Malvidae Singleton cluster - no MSA
123865722 5270 Rosid Singleton cluster - no MSA
123751299 5271 Pentapetalae View MSA
122788952 5272 Eudicot View MSA
122043015 5273 Angiosperm View MSA
121310063 5274 Embryophyte View MSA
123347659 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier