Gene : Brara.K01911 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10992//PTHR10992:SF792 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN Genomic Order:  8
Name:  ? Brara.K01911 Secondary Identifier:  ? PAC:30614953
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPAS-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01911 0.5kb upstream 0.5kb upstream 1851 true Scaffold9832: 24762-26612 Brassica rapa FPsc
Brara.K01911 0.5kb upstream 0.5kb upstream 500 false Scaffold9832: 24762-25261 Brassica rapa FPsc
Brara.K01911 0.5kb downstream 0.5kb downstream 1851 true Scaffold9832: 25262-27112 Brassica rapa FPsc
Brara.K01911 0.5kb downstream 0.5kb downstream 500 false Scaffold9832: 26613-27112 Brassica rapa FPsc
Brara.K01911 1.0kb upstream 1.0kb upstream 2351 true Scaffold9832: 24262-26612 Brassica rapa FPsc
Brara.K01911 1.0kb upstream 1.0kb upstream 1000 false Scaffold9832: 24262-25261 Brassica rapa FPsc
Brara.K01911 1.0kb downstream 1.0kb downstream 2351 true Scaffold9832: 25262-27612 Brassica rapa FPsc
Brara.K01911 1.0kb downstream 1.0kb downstream 1000 false Scaffold9832: 26613-27612 Brassica rapa FPsc
Brara.K01911 2.0kb upstream 2.0kb upstream 3351 true Scaffold9832: 23262-26612 Brassica rapa FPsc
Brara.K01911 2.0kb upstream 2.0kb upstream 2000 false Scaffold9832: 23262-25261 Brassica rapa FPsc
Brara.K01911 2.0kb downstream 2.0kb downstream 3351 true Scaffold9832: 25262-28612 Brassica rapa FPsc
Brara.K01911 2.0kb downstream 2.0kb downstream 2000 false Scaffold9832: 26613-28612 Brassica rapa FPsc
Brara.K01911 5.0kb upstream 5.0kb upstream 6351 true Scaffold9832: 20262-26612 Brassica rapa FPsc
Brara.K01911 5.0kb upstream 5.0kb upstream 5000 false Scaffold9832: 20262-25261 Brassica rapa FPsc
Brara.K01911 5.0kb downstream 5.0kb downstream 6351 true Scaffold9832: 25262-31612 Brassica rapa FPsc
Brara.K01911 5.0kb downstream 5.0kb downstream 5000 false Scaffold9832: 26613-31612 Brassica rapa FPsc
Brara.K01911 10.0kb upstream 10.0kb upstream 11351 true Scaffold9832: 15262-26612 Brassica rapa FPsc
Brara.K01911 10.0kb upstream 10.0kb upstream 10000 false Scaffold9832: 15262-25261 Brassica rapa FPsc
Brara.K01911 10.0kb downstream 10.0kb downstream 11351 true Scaffold9832: 25262-36612 Brassica rapa FPsc
Brara.K01911 10.0kb downstream 10.0kb downstream 10000 false Scaffold9832: 26613-36612 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367140 5261 Brassicaceae View MSA
123841298 5264 Brassicales-Malvales View MSA
124342133 5266 SBM View MSA
124239723 5268 Malvidae View MSA
124070444 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier