Gene : Brara.K01899 B. rapa FPsc v1.3
Defline:  (1 of 1) 2.4.1.260 - Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichol alpha-1,6-mannosyltransferase / Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl alpha-6-mannosyltransferase Genomic Order:  2
Name:  ? Brara.K01899 Secondary Identifier:  ? PAC:30631960
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01899 0.5kb upstream 0.5kb upstream 3014 true Scaffold9452: 527-3540 Brassica rapa FPsc
Brara.K01899 0.5kb upstream 0.5kb upstream 500 false Scaffold9452: 527-1026 Brassica rapa FPsc
Brara.K01899 0.5kb downstream 0.5kb downstream 2519 true Scaffold9452: 1027-3545 Brassica rapa FPsc
Brara.K01899 0.5kb downstream 0.5kb downstream 5 false Scaffold9452: 3541-3545 Brassica rapa FPsc
Brara.K01899 1.0kb upstream 1.0kb upstream 3514 true Scaffold9452: 27-3540 Brassica rapa FPsc
Brara.K01899 1.0kb upstream 1.0kb upstream 1000 false Scaffold9452: 27-1026 Brassica rapa FPsc
Brara.K01899 1.0kb downstream 1.0kb downstream 2519 true Scaffold9452: 1027-3545 Brassica rapa FPsc
Brara.K01899 1.0kb downstream 1.0kb downstream 5 false Scaffold9452: 3541-3545 Brassica rapa FPsc
Brara.K01899 2.0kb upstream 2.0kb upstream 3540 true Scaffold9452: 1-3540 Brassica rapa FPsc
Brara.K01899 2.0kb upstream 2.0kb upstream 1026 false Scaffold9452: 1-1026 Brassica rapa FPsc
Brara.K01899 2.0kb downstream 2.0kb downstream 2519 true Scaffold9452: 1027-3545 Brassica rapa FPsc
Brara.K01899 2.0kb downstream 2.0kb downstream 5 false Scaffold9452: 3541-3545 Brassica rapa FPsc
Brara.K01899 5.0kb upstream 5.0kb upstream 3540 true Scaffold9452: 1-3540 Brassica rapa FPsc
Brara.K01899 5.0kb upstream 5.0kb upstream 1026 false Scaffold9452: 1-1026 Brassica rapa FPsc
Brara.K01899 5.0kb downstream 5.0kb downstream 2519 true Scaffold9452: 1027-3545 Brassica rapa FPsc
Brara.K01899 5.0kb downstream 5.0kb downstream 5 false Scaffold9452: 3541-3545 Brassica rapa FPsc
Brara.K01899 10.0kb upstream 10.0kb upstream 3540 true Scaffold9452: 1-3540 Brassica rapa FPsc
Brara.K01899 10.0kb upstream 10.0kb upstream 1026 false Scaffold9452: 1-1026 Brassica rapa FPsc
Brara.K01899 10.0kb downstream 10.0kb downstream 2519 true Scaffold9452: 1027-3545 Brassica rapa FPsc
Brara.K01899 10.0kb downstream 10.0kb downstream 5 false Scaffold9452: 3541-3545 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351059 5261 Brassicaceae Singleton cluster - no MSA
123840299 5264 Brassicales-Malvales View MSA
124345602 5266 SBM View MSA
124251760 5268 Malvidae View MSA
124065105 5270 Rosid View MSA
123738429 5271 Pentapetalae View MSA
122789475 5272 Eudicot View MSA
122046384 5273 Angiosperm View MSA
121345023 5274 Embryophyte View MSA
123424059 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier