Gene : Brara.C02556 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11751:SF340 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 11-RELATED Genomic Order:  2556
Name:  ? Brara.C02556 Secondary Identifier:  ? PAC:30616845
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ETHYL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7270 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02556 0.5kb upstream 0.5kb upstream 2187 true A03: 12886311-12888497 Brassica rapa FPsc
Brara.C02556 0.5kb upstream 0.5kb upstream 500 false A03: 12886311-12886810 Brassica rapa FPsc
Brara.C02556 0.5kb downstream 0.5kb downstream 2187 true A03: 12886811-12888997 Brassica rapa FPsc
Brara.C02556 0.5kb downstream 0.5kb downstream 500 false A03: 12888498-12888997 Brassica rapa FPsc
Brara.C02556 1.0kb upstream 1.0kb upstream 2687 true A03: 12885811-12888497 Brassica rapa FPsc
Brara.C02556 1.0kb upstream 1.0kb upstream 1000 false A03: 12885811-12886810 Brassica rapa FPsc
Brara.C02556 1.0kb downstream 1.0kb downstream 2687 true A03: 12886811-12889497 Brassica rapa FPsc
Brara.C02556 1.0kb downstream 1.0kb downstream 1000 false A03: 12888498-12889497 Brassica rapa FPsc
Brara.C02556 2.0kb upstream 2.0kb upstream 3687 true A03: 12884811-12888497 Brassica rapa FPsc
Brara.C02556 2.0kb upstream 2.0kb upstream 2000 false A03: 12884811-12886810 Brassica rapa FPsc
Brara.C02556 2.0kb downstream 2.0kb downstream 3687 true A03: 12886811-12890497 Brassica rapa FPsc
Brara.C02556 2.0kb downstream 2.0kb downstream 2000 false A03: 12888498-12890497 Brassica rapa FPsc
Brara.C02556 5.0kb upstream 5.0kb upstream 6687 true A03: 12881811-12888497 Brassica rapa FPsc
Brara.C02556 5.0kb upstream 5.0kb upstream 5000 false A03: 12881811-12886810 Brassica rapa FPsc
Brara.C02556 5.0kb downstream 5.0kb downstream 6687 true A03: 12886811-12893497 Brassica rapa FPsc
Brara.C02556 5.0kb downstream 5.0kb downstream 5000 false A03: 12888498-12893497 Brassica rapa FPsc
Brara.C02556 10.0kb upstream 10.0kb upstream 11687 true A03: 12876811-12888497 Brassica rapa FPsc
Brara.C02556 10.0kb upstream 10.0kb upstream 10000 false A03: 12876811-12886810 Brassica rapa FPsc
Brara.C02556 10.0kb downstream 10.0kb downstream 11687 true A03: 12886811-12898497 Brassica rapa FPsc
Brara.C02556 10.0kb downstream 10.0kb downstream 10000 false A03: 12888498-12898497 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511314 5273 Angiosperm View MSA
122375111 5261 Brassicaceae View MSA
123800881 5264 Brassicales-Malvales View MSA
124298242 5266 SBM View MSA
124149936 5268 Malvidae View MSA
123875646 5270 Rosid View MSA
123459435 5271 Pentapetalae View MSA
122494826 5272 Eudicot View MSA
120784365 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier